RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 IGKV1D-16P01601 117 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 NAGAP17050 411 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 GPX2P18283 190 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 KHKP50053 298 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 NRG3P56975 720 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 MRPS22P82650 360 aaKnown RBP18.37■□□□□ 0.53
ACTB-210ENST00000477812 PLCXD2Q0VAA5 305 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 FUT5Q11128 374 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 SELPLGQ14242 412 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 RGNQ15493 299 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 NTRK2Q16620 822 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 HEPHL1Q6MZM0 1159 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 OPN5Q6U736 354 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 GPALPP1Q8IXQ4 340 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 BCORP1Q8N888 145 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 MDS2Q8NDY4 140 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 C9orf43Q8TAL5 461 aaPredicted RBP18.37■□□□□ 0.53
ACTB-210ENST00000477812 ADAMTS15Q8TE58 950 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 RAB8BQ92930 207 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 ROPN1LQ96C74 230 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 GPATCH1Q9BRR8 931 aaKnown RBP18.37■□□□□ 0.53
ACTB-210ENST00000477812 ARHGAP9Q9BRR9 750 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 BTBD2Q9BX70 525 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 EFCAB1Q9HAE3 211 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 ANKRD10Q9NXR5 420 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.37■□□□□ 0.53
ACTB-210ENST00000477812 CBLCQ9ULV8 474 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 OR10H1Q9Y4A9 318 aa18.37■□□□□ 0.53
ACTB-210ENST00000477812 BSNQ9UPA5 3926 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 DUXAA6NLW8 204 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 A8MVJ9 347 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 TNFRSF21O75509 655 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 PPM1BO75688 479 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 SOX30O94993 753 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 KCNK2O95069 426 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 F10P00742 488 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 OR12D1P0DN82 309 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 T-ENOLP0DO92 83 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 ETFAP13804 333 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 PPIBP23284 216 aaKnown RBP18.36■□□□□ 0.53
ACTB-210ENST00000477812 CPA2P48052 419 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 CYB561P49447 251 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 TNFSF10P50591 281 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 MTPNP58546 118 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 FADDQ13158 208 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 ANGPTL8Q6UXH0 198 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 DND1Q8IYX4 353 aaKnown RBP18.36■□□□□ 0.53
ACTB-210ENST00000477812 TMEM156Q8N614 296 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 COX18Q8N8Q8 333 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 CHDHQ8NE62 594 aaPredicted RBP18.36■□□□□ 0.53
ACTB-210ENST00000477812 WBP1Q96G27 269 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 RMND5BQ96G75 393 aaPredicted RBP18.36■□□□□ 0.53
ACTB-210ENST00000477812 SIGLEC12Q96PQ1 595 aa18.36■□□□□ 0.53
ACTB-210ENST00000477812 UTP23Q9BRU9 249 aaKnown RBP18.36■□□□□ 0.53
ACTB-210ENST00000477812 OR6C70A6NIJ9 312 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 UGT2B11O75310 529 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 IL33O95760 270 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 SLC6A2P23975 617 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 NUDT2P50583 147 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 FBXW4P57775 412 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 POU6F2P78424 691 aaPredicted RBP18.35■□□□□ 0.53
ACTB-210ENST00000477812 MAPK11Q15759 364 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.35■□□□□ 0.531e-17■■□□□ 12.5
ACTB-210ENST00000477812 LACTB2Q53H82 288 aaPredicted RBP18.35■□□□□ 0.53
ACTB-210ENST00000477812 DESI1Q6ICB0 168 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 NANOGP8Q6NSW7 305 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 ASB18Q6ZVZ8 466 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 ZAR1Q86SH2 424 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 HPS6Q86YV9 775 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 RBMXL3Q8N7X1 1067 aaKnown RBP18.35■□□□□ 0.53
ACTB-210ENST00000477812 OR10G3Q8NGC4 313 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 OR8J3Q8NGG0 315 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 FBXO27Q8NI29 283 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 RNF138Q8WVD3 245 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 TM9SF4Q92544 642 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 DIO2Q92813 273 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 HGDQ93099 445 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 NANOGQ9H9S0 305 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 FBXO34Q9NWN3 711 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 GID8Q9NWU2 228 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 HPF1Q9NWY4 346 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 LRFN1Q9P244 771 aa18.35■□□□□ 0.53
ACTB-210ENST00000477812 CHCHD2Q9Y6H1 151 aaPredicted RBP18.35■□□□□ 0.53
ACTB-210ENST00000477812 ZFYVE26Q68DK2 2539 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 ZIC2O95409 532 aaPredicted RBP18.34■□□□□ 0.53
ACTB-210ENST00000477812 AGR2O95994 175 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 NUDT7P0C024 238 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 CASRP41180 1078 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 CRATP43155 626 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 TMED10P49755 219 aaKnown RBP18.34■□□□□ 0.53
ACTB-210ENST00000477812 ARG2P78540 354 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 OC90Q02509 493 aaPredicted RBP18.34■□□□□ 0.53
ACTB-210ENST00000477812 OR1C1Q15619 314 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 DECR1Q16698 335 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 RABL3Q5HYI8 236 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 DCST2Q5T1A1 773 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 CCNJQ5T5M9 372 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 AP1ARQ63HQ0 302 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 FIGNL1Q6PIW4 674 aa18.34■□□□□ 0.53
ACTB-210ENST00000477812 C6orf89Q6UWU4 347 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms