RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 DUSP21Q9H596 190 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 EQTNQ9NQ60 294 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 IRAK4Q9NWZ3 460 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 IMPAD1Q9NX62 359 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 NDOR1Q9UHB4 597 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 PILRBQ9UKJ0 227 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 FBXO4Q9UKT5 387 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 A4GNTQ9UNA3 340 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 MRPS2Q9Y399 296 aaKnown RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 A0A0A6YYC8 382 aaPredicted RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 IGHV5-51A0A0C4DH38 117 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 ZNF860A6NHJ4 632 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 ZAR1LA6NP61 321 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 TMEM150CB9EJG8 249 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 I3L1I5 382 aaPredicted RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 FFAR1O14842 300 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 PCDH17O14917 1159 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 KIF1CO43896 1103 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 KIAA0513O60268 411 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 OR10H3O60404 316 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 BRINP1O60477 761 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 MITFO75030 526 aaPredicted RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 LDB3O75112 727 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 OR2B3O76000 313 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 AVPP01185 164 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 CYC1P08574 325 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 CCNYL3P0C7X3 344 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 ACP2P11117 423 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 TDGF1P13385 188 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 NID1P14543 1247 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 IL7RP16871 459 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 NELFEP18615 380 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 ITIH1P19827 911 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 TNFRSF1BP20333 461 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 ELAVL4P26378 380 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 TRHRP34981 398 aaPredicted RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 DHPSP49366 369 aaPredicted RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 DUSP3P51452 185 aaPredicted RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 CRISP1P54107 249 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 TMBIM6P55061 237 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 TAS2R41P59536 307 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 DCAF7P61962 342 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 OLR1P78380 273 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 FUT7Q11130 342 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 PPP1R8Q12972 351 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 DUSP5Q16690 384 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 TMEM44Q2T9K0 475 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 CNPY1Q3B7I2 92 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 FGD3Q5JSP0 725 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 DCST2Q5T1A1 773 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 FOXB2Q5VYV0 432 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 CWF19L1Q69YN2 538 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 TYW3Q6IPR3 259 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 C1orf94Q6P1W5 598 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 TMEM71Q6P5X7 295 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 FAM111BQ6SJ93 734 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 DEF8Q6ZN54 512 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 FRRS1Q6ZNA5 592 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 RBM44Q6ZP01 1051 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 QSOX2Q6ZRP7 698 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 KCTD8Q6ZWB6 473 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 RRM2BQ7LG56 351 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 PRSS48Q7RTY5 328 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 GRAMD2AQ8IUY3 354 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 SFTPA2Q8IWL1 248 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 SLC35F3Q8IY50 421 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 RNF113BQ8IZP6 322 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 SLC43A2Q8N370 569 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 SLC25A45Q8N413 288 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 OR4C6Q8NH72 309 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 RHOXF1Q8NHV9 184 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 C9orf43Q8TAL5 461 aaPredicted RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 GNPDA2Q8TDQ7 276 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 ZFAND2BQ8WV99 257 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 CDS1Q92903 461 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 MYDGFQ969H8 173 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 MMABQ96EY8 250 aaPredicted RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 BARD1Q99728 777 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 YIPF4Q9BSR8 244 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 NDC1Q9BTX1 674 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 HOXD1Q9GZZ0 328 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 ZNF768Q9H5H4 540 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 SOX17Q9H6I2 414 aaPredicted RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 POLR1BQ9H9Y6 1135 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 Q9N2J8 555 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 ADAP2Q9NPF8 381 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 CUTCQ9NTM9 273 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 UCKL1Q9NWZ5 548 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 CNOT2Q9NZN8 540 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 TESQ9UGI8 421 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 MUTYHQ9UIF7 546 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 MRTO4Q9UKD2 239 aaKnown RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 ZNF443Q9Y2A4 671 aaPredicted RBP7.4□□□□□ -1.22
VMA21-203ENST00000477649 PCDHGA6Q9Y5G7 932 aa7.4□□□□□ -1.22
VMA21-203ENST00000477649 IRGMA1A4Y4 181 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 EFCAB10A6NFE3 127 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 CCDC160A6NGH7 325 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 SNTNA6NMZ2 147 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 J3KTA2 159 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 M0R3G1 203 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms