RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MAZP56270 477 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 YBEYP58557 167 aaPredicted RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 B3GALT5-AS1P59052 145 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 EIF3EP60228 445 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 OTUD4Q01804 1114 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 GNA12Q03113 381 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 KDSRQ06136 332 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 SULT2A1Q06520 285 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 FCHO2Q0JRZ9 810 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 AP1B1Q10567 949 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 RUNX3Q13761 415 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 DPYSQ14117 519 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 DMC1Q14565 340 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 PAFAH1B3Q15102 231 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 PDK1Q15118 436 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 E2F5Q15329 346 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 VWC2Q2TAL6 325 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 ITPRIPL2Q3MIP1 535 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 PARP15Q460N3 678 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 SPDYCQ5MJ68 293 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 MPP7Q5T2T1 576 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 CST9LP1Q5W188 147 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 NCBP2-AS2Q69YL0 99 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 TMPRSS11BQ86T26 416 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 CTAGE6Q86UF2 777 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 TMEM25Q86YD3 366 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 LRRC49Q8IUZ0 686 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 CDKL3Q8IVW4 592 aaPredicted RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 LMNTD2Q8IXW0 634 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 BBS5Q8N3I7 341 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 ATPAF2Q8N5M1 289 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 RTL3Q8N8U3 475 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 AMER3Q8N944 861 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 CCNYQ8ND76 341 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 OR52N5Q8NH56 324 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 FIBINQ8TAL6 211 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 ACTL9Q8TC94 416 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 ACTRT1Q8TDG2 376 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 GRK7Q8WTQ7 553 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 ZFAND2BQ8WV99 257 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 TFB1MQ8WVM0 346 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 C1orf54Q8WWF1 131 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 HPSE2Q8WWQ2 592 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 DNASE1L2Q92874 299 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 MAGOHBQ96A72 148 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 FAF2Q96CS3 445 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 OMA1Q96E52 524 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 NSL1Q96IY1 281 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 CELF6Q96J87 481 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 MS4A14Q96JA4 679 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 CCDC114Q96M63 670 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 PRICKLE1Q96MT3 831 aaPredicted RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 RUNDC3BQ96NL0 473 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 AP1M1Q9BXS5 423 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 SLC2A11Q9BYW1 496 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 FRMD8P1Q9BZ68 369 aaPredicted RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 PLA2G2FQ9BZM2 168 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 C8orf33Q9H7E9 229 aaPredicted RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 ECT2Q9H8V3 914 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 A4GALTQ9NPC4 353 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 DNAJC17Q9NVM6 304 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 SEPT10Q9P0V9 454 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 DEC1Q9P2X7 70 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 SLC24A2Q9UI40 661 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 GGA2Q9UJY4 613 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 CCL27Q9Y4X3 112 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 MYO18AQ92614 2054 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 DNAH12Q6ZR08 3092 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 CHD5Q8TDI0 1954 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 NYNRINQ9P2P1 1898 aaKnown RBP3.44□□□□□ -1.86
UBR3-209ENST00000477461 ZSCAN5CA6NGD5 496 aaPredicted RBP3.44□□□□□ -1.86
UBR3-209ENST00000477461 A8MXE2 369 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 LOC730098B7Z3J9 87 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 TRIM77I1YAP6 450 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 SGK1O00141 431 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 PI15O43692 258 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 MFSD11O43934 449 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 CACNG3O60359 315 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 DFFBO76075 338 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 PENKP01210 267 aaPredicted RBP3.44□□□□□ -1.86
UBR3-209ENST00000477461 IFNB1P01574 187 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 DNTTP04053 509 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 APODP05090 189 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 ATP5BP06576 529 aaKnown RBP3.44□□□□□ -1.86
UBR3-209ENST00000477461 GP1BBP13224 206 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 MPZP25189 248 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 STIP1P31948 543 aaKnown RBP3.44□□□□□ -1.86
UBR3-209ENST00000477461 CHRNA3P32297 505 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 CSKP41240 450 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 TNNT3P45378 269 aaPredicted RBP3.44□□□□□ -1.86
UBR3-209ENST00000477461 RAB28P51157 221 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 SGSHP51688 502 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 ST8SIA6P61647 398 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 GBE1Q04446 702 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 C2orf54Q08AI8 447 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 DMPKQ09013 629 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 RALGDSQ12967 914 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 XRCC4Q13426 336 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 SNX1Q13596 522 aa3.44□□□□□ -1.86
UBR3-209ENST00000477461 ZNF235Q14590 738 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms