RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 CCDC22O60826 627 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 PPM1BO75688 479 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 C1QL1O75973 258 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 ANP32DO95626 131 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 SP1P08047 785 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 ALOX5P09917 674 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 CHI3L1P36222 383 aaPredicted RBP14.6□□□□□ -0.07
COPS3-207ENST00000477299 PIGAP37287 484 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 PRIM2P49643 509 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 GPR85P60893 370 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 DCAF7P61962 342 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 PLCXD2Q0VAA5 305 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 SELPLGQ14242 412 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 NTRK2Q16620 822 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 PRR30Q53SZ7 412 aaPredicted RBP14.6□□□□□ -0.07
COPS3-207ENST00000477299 ZNF766Q5HY98 468 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.6□□□□□ -0.07
COPS3-207ENST00000477299 LRIF1Q5T3J3 769 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 PRAMEF20Q5VT98 475 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 OPN5Q6U736 354 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 SLC15A4Q8N697 577 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 CDRT4Q8N9R6 151 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 HGDQ93099 445 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 ADOQ96SZ5 270 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 TPT1P8Q9HAU6 139 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 SH2D2AQ9NP31 389 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 CBLCQ9ULV8 474 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 OR10H1Q9Y4A9 318 aa14.6□□□□□ -0.07
COPS3-207ENST00000477299 CHCHD2Q9Y6H1 151 aaPredicted RBP14.6□□□□□ -0.07
COPS3-207ENST00000477299 ANGPT2O15123 496 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 SLC25A12O75746 678 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 KCNK2O95069 426 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 ZCCHC18P0CG32 403 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 COX4I1P13073 169 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 CYP4B1P13584 511 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 RFC3P40938 356 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 RNF144AP50876 292 aaPredicted RBP14.59□□□□□ -0.07
COPS3-207ENST00000477299 MRPS22P82650 360 aaKnown RBP14.59□□□□□ -0.07
COPS3-207ENST00000477299 CAPRIN1Q14444 709 aaKnown RBP14.59□□□□□ -0.07
COPS3-207ENST00000477299 ZNF169Q14929 603 aaPredicted RBP14.59□□□□□ -0.07
COPS3-207ENST00000477299 INPP5JQ15735 1006 aaPredicted RBP14.59□□□□□ -0.07
COPS3-207ENST00000477299 REP15Q6BDI9 236 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 SLC25A25Q6KCM7 469 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 ANGPTL8Q6UXH0 198 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 GALNTL5Q7Z4T8 443 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 TEX19Q8NA77 164 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 PSD4Q8NDX1 1056 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 ADAMTS15Q8TE58 950 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 TM9SF4Q92544 642 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 MOAP1Q96BY2 351 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 SCMH1Q96GD3 660 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 TAAR6Q96RI8 345 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 SLC39A3Q9BRY0 314 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 PIGUQ9H490 435 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 LEF1Q9UJU2 399 aaPredicted RBP14.59□□□□□ -0.07
COPS3-207ENST00000477299 FAF1Q9UNN5 650 aaPredicted RBP14.59□□□□□ -0.07
COPS3-207ENST00000477299 B3GNT3Q9Y2A9 372 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 NTNG1Q9Y2I2 539 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 HRH3Q9Y5N1 445 aa14.59□□□□□ -0.07
COPS3-207ENST00000477299 SVILO95425 2214 aa14.58□□□□□ -0.07
COPS3-207ENST00000477299 NPIPA5A0A0B4J1W7 369 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 TRAV17A0A0B4J275 112 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 CAPN14A8MX76 684 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 NPIPA7E9PJI5 369 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 HMGN4O00479 90 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 ADAM10O14672 748 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 ACOX3O15254 700 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 ZIC2O95409 532 aaPredicted RBP14.58□□□□□ -0.08
COPS3-207ENST00000477299 NUDT7P0C024 238 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 NPIPA8P0DM63 369 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 SFTPCP11686 197 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 ETFAP13804 333 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 CASRP41180 1078 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 DNASE1L1P49184 302 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 NRG3P56975 720 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 FUT5Q11128 374 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 KLRB1Q12918 225 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 CYLC2Q14093 348 aaPredicted RBP14.58□□□□□ -0.08
COPS3-207ENST00000477299 ZNHIT3Q15649 155 aaPredicted RBP14.58□□□□□ -0.08
COPS3-207ENST00000477299 MAPK11Q15759 364 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 RUNDC3AQ59EK9 446 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 ZCCHC12Q6PEW1 402 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 RTL4Q6ZR62 310 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.58□□□□□ -0.08
COPS3-207ENST00000477299 SULF2Q8IWU5 870 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 DPP10Q8N608 796 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 COX18Q8N8Q8 333 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 FAM110BQ8TC76 370 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 MIPOL1Q8TD10 442 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 TSPEARQ8WU66 669 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 XAGE5Q8WWM1 108 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 PNPLA2Q96AD5 504 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 RCN3Q96D15 328 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 RTN4RQ9BZR6 473 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 Q9N2J8 555 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 ARL8BQ9NVJ2 186 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 CNOT11Q9UKZ1 510 aaKnown RBP14.58□□□□□ -0.08
COPS3-207ENST00000477299 SHANK1Q9Y566 2161 aa14.58□□□□□ -0.08
COPS3-207ENST00000477299 SMG1Q96Q15 3661 aaKnown RBP14.57□□□□□ -0.08
COPS3-207ENST00000477299 FXYD1O00168 92 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms