RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 DNAJC27Q9NZQ0 273 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 POMT2Q9UKY4 750 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 NDRG2Q9UN36 371 aaKnown RBP10.74□□□□□ -0.69
NUP188-205ENST00000477069 IFT52Q9Y366 437 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 SCN2AQ99250 2005 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 NTN1O95631 604 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 DBTP11182 482 aaKnown RBP10.74□□□□□ -0.69
NUP188-205ENST00000477069 GSTM3P21266 225 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 OMPP47874 163 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 EEF1A1P68104 462 aaKnown RBP10.74□□□□□ -0.69
NUP188-205ENST00000477069 MLLT1Q03111 559 aaPredicted RBP10.74□□□□□ -0.69
NUP188-205ENST00000477069 TRAM2Q15035 370 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 PRICKLE4Q2TBC4 344 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 PUS10Q3MIT2 529 aaKnown RBP10.74□□□□□ -0.69
NUP188-205ENST00000477069 ZNF836Q6ZNA1 936 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 PRICKLE2Q7Z3G6 844 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 ZNF438Q7Z4V0 828 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 ATCAYQ86WG3 371 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 GJD3Q8N144 294 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 TCEANCQ8N8B7 351 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 SDF2Q99470 211 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 GPR174Q9BXC1 333 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 ZNF350Q9GZX5 532 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 MKLN1Q9UL63 735 aa10.74□□□□□ -0.69
NUP188-205ENST00000477069 CENPVL1A0A0U1RR11 272 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 CPSF4LA6NMK7 179 aaKnown RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 CHURC1-FNTBB4DL54 471 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 MAGEB3O15480 346 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 MBTPS2O43462 519 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 KLF4O43474 513 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 PLOD3O60568 738 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 SULT1C4O75897 302 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 TNNI3P19429 210 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 NUDT1P36639 197 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 GIPRP48546 466 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 PCYT1AP49585 367 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 TUBA1BP68363 451 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 ZNF91Q05481 1191 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 DUSP8Q13202 625 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 ZNF846Q147U1 533 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 NR1D2Q14995 579 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 TUBA1AQ71U36 451 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 BCDIN3DQ7Z5W3 292 aaKnown RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 TAF8Q7Z7C8 310 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 ZNF761Q86XN6 746 aaPredicted RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 CSNK1A1LQ8N752 337 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 B4GALNT2Q8NHY0 566 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 GNPDA2Q8TDQ7 276 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 HOXB13Q92826 284 aaPredicted RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 ZHX1-C8orf76Q96EF9 292 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 LRRC61Q9BV99 259 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 NXF2Q9GZY0 626 aaKnown RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 SAP130Q9H0E3 1048 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 DCSTAMPQ9H295 470 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 PIGUQ9H490 435 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 MTHFD2LQ9H903 347 aaPredicted RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 ANKHQ9HCJ1 492 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 ERGIC3Q9Y282 383 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 BRWD1Q9NSI6 2320 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 LDB3O75112 727 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 EIF2S1P05198 315 aaKnown RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 RPLP0P05388 317 aaKnown RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 THBS1P07996 1170 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 ZNF12P17014 697 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 CSTF2P33240 577 aaKnown RBP eCLIP10.73□□□□□ -0.69
NUP188-205ENST00000477069 GAS1P54826 345 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 SHC2P98077 582 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 RHAGQ02094 409 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 ID2Q02363 134 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 HHEXQ03014 270 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 ST3GAL3Q11203 375 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 TSPAN31Q12999 210 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 GINS1Q14691 196 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 NCF4Q15080 339 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 OOSP2Q86WS3 158 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 RBM12BQ8IXT5 1001 aaKnown RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 ZNF655Q8N720 491 aaPredicted RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 OR8D4Q8NGM9 314 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 ANKRD9Q96BM1 317 aaPredicted RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 CTHRC1Q96CG8 243 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 WDR12Q9GZL7 423 aaKnown RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 OR51E2Q9H255 320 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 TTYH1Q9H313 450 aaPredicted RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 SEMA6CQ9H3T2 930 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 EGLN3Q9H6Z9 239 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 FAM60AQ9NP50 221 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 MAT2BQ9NZL9 334 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 SATB2Q9UPW6 733 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 NTNG1Q9Y2I2 539 aa10.73□□□□□ -0.69
NUP188-205ENST00000477069 RPL36Q9Y3U8 105 aaKnown RBP10.73□□□□□ -0.69
NUP188-205ENST00000477069 AGAP5A6NIR3 686 aa10.72□□□□□ -0.69
NUP188-205ENST00000477069 CNOT3O75175 753 aaKnown RBP10.72□□□□□ -0.69
NUP188-205ENST00000477069 GPR75O95800 540 aa10.72□□□□□ -0.69
NUP188-205ENST00000477069 CTSBP07858 339 aa10.72□□□□□ -0.69
NUP188-205ENST00000477069 BMP4P12644 408 aa10.72□□□□□ -0.69
NUP188-205ENST00000477069 AVPR1BP47901 424 aa10.72□□□□□ -0.69
NUP188-205ENST00000477069 SERPINB10P48595 397 aa10.72□□□□□ -0.69
NUP188-205ENST00000477069 ZNF136P52737 540 aa10.72□□□□□ -0.69
NUP188-205ENST00000477069 SSX1Q16384 188 aa10.72□□□□□ -0.69
NUP188-205ENST00000477069 DECR1Q16698 335 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms