RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 OTUB1Q96FW1 271 aaPredicted RBP15.42■□□□□ 0.06
TMEM53-208ENST00000476724 PRDM9Q9NQV7 894 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 NTMQ9P121 344 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 PHF11Q9UIL8 331 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 ZNF229Q9UJW7 825 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 KCNE3Q9Y6H6 103 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 LRP4O75096 1905 aa15.42■□□□□ 0.06
TMEM53-208ENST00000476724 SNRNP200O75643 2136 aaKnown RBP15.41■□□□□ 0.06
TMEM53-208ENST00000476724 A0A087WUU8 490 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 TBX1O43435 398 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 CKMT1AP12532 417 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 TSPAN31Q12999 210 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 ACSM5Q6NUN0 579 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 SLC27A4Q6P1M0 643 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 RRM2BQ7LG56 351 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 OLIG3Q7RTU3 272 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 C16orf62Q7Z3J2 963 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 EGFL6Q8IUX8 553 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 CADM3Q8N126 398 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 GALNT6Q8NCL4 622 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 CCL4L1Q8NHW4 92 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 TEX47Q8TBZ9 253 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 ADAMTS15Q8TE58 950 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 TOE1Q96GM8 510 aaKnown RBP15.41■□□□□ 0.06
TMEM53-208ENST00000476724 LRR1Q96L50 414 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 ASPNQ9BXN1 380 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 FOXQ1Q9C009 403 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 NDUFB11Q9NX14 153 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 TBC1D29Q9UFV1 150 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 TESQ9UGI8 421 aaKnown RBP15.41■□□□□ 0.06
TMEM53-208ENST00000476724 CLEC2DQ9UHP7 191 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 FANCMQ8IYD8 2048 aa15.41■□□□□ 0.06
TMEM53-208ENST00000476724 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 URADA6NGE7 173 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 SLC35G6P0C7Q6 338 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 AK4P27144 223 aaPredicted RBP15.4■□□□□ 0.06
TMEM53-208ENST00000476724 CHRNEQ04844 493 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 KIR2DS3Q14952 304 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 UBXN2BQ14CS0 331 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 SNAPC1Q16533 368 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 STEAP3Q658P3 488 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 VN1R4Q7Z5H5 301 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 CCDC190Q86UF4 302 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 CLIP4Q8N3C7 705 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 IQCF1Q8N6M8 205 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 TOR1AIP2Q8NFQ8 470 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 RLN3Q8WXF3 142 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 GIMAP5Q96F15 307 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 FAM210AQ96ND0 272 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 ZNF582Q96NG8 517 aaPredicted RBP15.4■□□□□ 0.06
TMEM53-208ENST00000476724 TPSD1Q9BZJ3 242 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 SRMSQ9H3Y6 488 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 EXOSC4Q9NPD3 245 aaKnown RBP15.4■□□□□ 0.06
TMEM53-208ENST00000476724 SSR3Q9UNL2 185 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 MN1Q10571 1320 aaPredicted RBP15.4■□□□□ 0.06
TMEM53-208ENST00000476724 CHURC1-FNTBB4DL54 471 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 EML2O95834 649 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 PTTG1O95997 202 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 RAB40BQ12829 278 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 SUZ12Q15022 739 aaKnown RBP15.4■□□□□ 0.06
TMEM53-208ENST00000476724 C3orf38Q5JPI3 329 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 HEPHL1Q6MZM0 1159 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 SLC36A4Q6YBV0 504 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 RASSF6Q6ZTQ3 369 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 WDR53Q7Z5U6 358 aaPredicted RBP15.4■□□□□ 0.06
TMEM53-208ENST00000476724 LRRC25Q8N386 305 aaPredicted RBP15.4■□□□□ 0.06
TMEM53-208ENST00000476724 FAM160A2Q8N612 972 aaPredicted RBP15.4■□□□□ 0.06
TMEM53-208ENST00000476724 POC5Q8NA72 575 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 OR52I1Q8NGK6 324 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 TMEM163Q8TC26 289 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 CEP19Q96LK0 163 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 C10orf90Q96M02 699 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 WDR92Q96MX6 357 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 SLC38A2Q96QD8 506 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 GPA33Q99795 319 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 CNPPD1Q9BV87 410 aa15.4■□□□□ 0.06
TMEM53-208ENST00000476724 FGF20Q9NP95 211 aaPredicted RBP15.4■□□□□ 0.06
TMEM53-208ENST00000476724 ZNF670-ZNF695F2Z2N8 137 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 AP3D1O14617 1153 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 PRODHO43272 600 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 APBB3O95704 486 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 IGLV3-19P01714 112 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 HBQ1P09105 142 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 CCNYL3P0C7X3 344 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 ACP2P11117 423 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 MYL12AP19105 171 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 PTGER1P34995 402 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 CRYBB2P43320 205 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 RORCP51449 518 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 DEFA1P59665 94 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 DEFA3P59666 94 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 COPZ1P61923 177 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 TNFRSF17Q02223 184 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 MLLT1Q03111 559 aaPredicted RBP15.39■□□□□ 0.05
TMEM53-208ENST00000476724 FAM214AQ32MH5 1076 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 CDC73Q6P1J9 531 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 KCT2Q8NC54 265 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 DIO2Q92813 273 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 TM4SF19Q96DZ7 209 aa15.39■□□□□ 0.05
TMEM53-208ENST00000476724 MS4A4EQ96PG1 132 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms