RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 COQ5Q5HYK3 327 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 C6orf89Q6UWU4 347 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 CISD2Q8N5K1 135 aaKnown RBP13.25□□□□□ -0.29
CCNL1-217ENST00000476367 TMEM178AQ8NBL3 297 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 OR5D16Q8NGK9 328 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 MIPOL1Q8TD10 442 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 TP53INP1Q96A56 240 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 SPACA9Q96E40 222 aaPredicted RBP13.25□□□□□ -0.29
CCNL1-217ENST00000476367 SLC35A4Q96G79 324 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 LCORQ96JN0 433 aaPredicted RBP13.25□□□□□ -0.29
CCNL1-217ENST00000476367 RMND5AQ9H871 391 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 TRIM45Q9H8W5 580 aaPredicted RBP13.25□□□□□ -0.29
CCNL1-217ENST00000476367 TPT1P8Q9HAU6 139 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 C3orf14Q9HBI5 128 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 PCDHGB4Q9UN71 923 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 SHANK1Q9Y566 2161 aa13.25□□□□□ -0.29
CCNL1-217ENST00000476367 GXYLT2A0PJZ3 443 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 FRG2CA6NGY1 282 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 TO15178 435 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 NKX2-2O95096 273 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 ZIC2O95409 532 aaPredicted RBP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 IGKV1D-16P01601 117 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 SP1P08047 785 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 DRD5P21918 477 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 ABCD3P28288 659 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 PRDX6P30041 224 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 GPR85P60893 370 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 PRR5P85299 388 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 TLE1Q04724 770 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 PLCXD2Q0VAA5 305 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 FUT5Q11128 374 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 CAPRIN1Q14444 709 aaKnown RBP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 SPDYE7PQ495Y7 208 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 RUNDC3AQ59EK9 446 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 SLC25A25Q6KCM7 469 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 RTL4Q6ZR62 310 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 RNF130Q86XS8 419 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 SLC44A2Q8IWA5 706 aaPredicted RBP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 GPALPP1Q8IXQ4 340 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 SLC15A4Q8N697 577 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 PSD4Q8NDX1 1056 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 OR56A1Q8NGH5 318 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 PNPT1Q8TCS8 783 aaKnown RBP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 SCMH1Q96GD3 660 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 CGREF1Q99674 301 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 CPPED1Q9BRF8 314 aaPredicted RBP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 GPATCH1Q9BRR8 931 aaKnown RBP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 IL1RL2Q9HB29 575 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 TIMMDC1Q9NPL8 285 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 FBXO34Q9NWN3 711 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 VPS4AQ9UN37 437 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 NPFFR2Q9Y5X5 522 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 FASNP49327 2511 aaKnown RBP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 SVILO95425 2214 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 BBIP1A8MTZ0 92 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 G3V3Y1 287 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 HMGN4O00479 90 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 ADAM10O14672 748 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 MRASO14807 208 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 ANGPT2O15123 496 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 NME2P1O60361 137 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 KCNH1O95259 989 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 FBXO45P0C2W1 286 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 CCL3P10147 92 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 NME2P22392 152 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 CPA2P48052 419 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 TMED10P49755 219 aaKnown RBP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 FBXW4P57775 412 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 DCAF7P61962 342 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 KRT72Q14CN4 511 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 INPP5JQ15735 1006 aaPredicted RBP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 TRMT5Q32P41 509 aaKnown RBP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 ZNF791Q3KP31 576 aaPredicted RBP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCNL1-217ENST00000476367 CDC73Q6P1J9 531 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 TRPM8Q7Z2W7 1104 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 ZAR1Q86SH2 424 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 DHDDSQ86SQ9 333 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 OR10G3Q8NGC4 313 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 CPT1CQ8TCG5 803 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 PIK3R3Q92569 461 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 LRRC58Q96CX6 371 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 ANKRD27Q96NW4 1050 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 ACTRT3Q9BYD9 372 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 NTNG1Q9Y2I2 539 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 OR10H1Q9Y4A9 318 aa13.24□□□□□ -0.29
CCNL1-217ENST00000476367 NCKAP5O14513 1909 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 A0A0G2JMM0 328 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 A0A1W2PPB8 328 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 A0A1W2PRS3 328 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 KIR3DP1A8MWS1 328 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 CLIC1O00299 241 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 CDK2AP1O14519 115 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 RRP9O43818 475 aaKnown RBP13.23□□□□□ -0.29
CCNL1-217ENST00000476367 RASAL1O95294 804 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 GZMMP51124 257 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 STX5Q13190 355 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 MAPRE2Q15555 327 aa13.23□□□□□ -0.29
CCNL1-217ENST00000476367 ZNHIT3Q15649 155 aaPredicted RBP13.23□□□□□ -0.29
CCNL1-217ENST00000476367 ADRM1Q16186 407 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms