RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 MS4A8Q9BY19 250 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 ZDHHC5Q9C0B5 715 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 DUSP15Q9H1R2 295 aaPredicted RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 OR52A5Q9H2C5 316 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 ANKRD19PQ9H560 264 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 DDX31Q9H8H2 851 aaKnown RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 CUEDC1Q9NWM3 386 aaPredicted RBP6.45□□□□□ -1.38
UBR4-212ENST00000475973 ASB6Q9NWX5 421 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 IMPAD1Q9NX62 359 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 ERVK13-1Q9NX77 482 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 GPR34Q9UPC5 381 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 LIPT1Q9Y234 373 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 CMAHPQ9Y471 501 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 RNF215Q9Y6U7 377 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 MAU2Q9Y6X3 613 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 GVINP1Q7Z2Y8 2422 aa6.45□□□□□ -1.38
UBR4-212ENST00000475973 A0A1B0GTQ1 180 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 A0A1W2PP55 124 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 ANKRD61A6NGH8 418 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 H3BM21 787 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 PLPP1O14494 284 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 PLD2O14939 933 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 PRODHO43272 600 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 IDH3BO43837 385 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 ZNF217O75362 1048 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 TGFB1P01137 390 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 H1F0P07305 194 aaKnown RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 IL3P08700 152 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 CISD3P0C7P0 127 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 LIMS3P0CW19 117 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 LIMS4P0CW20 117 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 ACP2P11117 423 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 PRKCAP17252 672 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 HK1P19367 917 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 CD53P19397 219 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 CFL1P23528 166 aaKnown RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 MMP11P24347 488 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 NTSR1P30989 418 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 SOX18P35713 384 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 ETV3P41162 512 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 P2RY2P41231 377 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 KIR2DL1P43626 348 aaPredicted RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 BDKRB1P46663 353 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 SLC6A11P48066 632 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 EVX1P49640 407 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 WNT4P56705 351 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 SHC2P98077 582 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 GALK2Q01415 458 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 BDH1Q02338 343 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 SCN1BQ07699 218 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 RIPPLY1Q0D2K3 151 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 SLAMF1Q13291 335 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 MED22Q15528 200 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 MINDY4Q4G0A6 757 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 GPAT3Q53EU6 434 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 ZNF805Q5CZA5 627 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 ZMAT1Q5H9K5 638 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 EXOSC6Q5RKV6 272 aaKnown RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 DCST1Q5T197 706 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 STPG1Q5TH74 334 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 LYSMD4Q5XG99 296 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 VASNQ6EMK4 673 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 MRM1Q6IN84 353 aaKnown RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 ACSM5Q6NUN0 579 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 SLC36A4Q6YBV0 504 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 FAM83HQ6ZRV2 1179 aaPredicted RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 UBE3DQ7Z6J8 389 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 RABEPKQ7Z6M1 372 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 NOXA1Q86UR1 476 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 TMEM25Q86YD3 366 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 PLCZ1Q86YW0 608 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 ZNF547Q8IVP9 402 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 LAX1Q8IWV1 398 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 PEX5LQ8IYB4 626 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 CACTIN-AS1Q8N1I8 211 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 TP53I13Q8NBR0 393 aaPredicted RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 OR52J3Q8NH60 311 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 WDR36Q8NI36 951 aaKnown RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 ZFAND1Q8TCF1 268 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 UTP15Q8TED0 518 aaKnown RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 SMPDL3AQ92484 453 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 GTPBP3Q969Y2 492 aaKnown RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 TMEM159Q96B96 161 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 TMEM19Q96HH6 336 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 COX14Q96I36 57 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 ZNF582Q96NG8 517 aaPredicted RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 GTPBP2Q9BX10 602 aaKnown RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 TSSK6Q9BXA6 273 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 NLNQ9BYT8 704 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 SLC22A4Q9H015 551 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 C11orf54Q9H0W9 315 aaPredicted RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 ZCCHC4Q9H5U6 513 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 ZNF275Q9NSD4 429 aaPredicted RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 MED17Q9NVC6 651 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 C14orf119Q9NWQ9 140 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 NTMQ9P121 344 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 ACSL6Q9UKU0 697 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 CBLCQ9ULV8 474 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 POLHQ9Y253 713 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 EXOSC1Q9Y3B2 195 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms