RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MID1IP1Q9NPA3 183 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 DLL4Q9NR61 685 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 NMRK1Q9NWW6 199 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 TAS2R7Q9NYW3 318 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 CLCF1Q9UBD9 225 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 TBK1Q9UHD2 729 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 RPH3AQ9Y2J0 694 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 MRPS18CQ9Y3D5 142 aaKnown RBP6.36□□□□□ -1.39
HDAC3-207ENST00000475549 WIF1Q9Y5W5 379 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 NCKAP5O14513 1909 aa6.36□□□□□ -1.39
HDAC3-207ENST00000475549 INTS1Q8N201 2190 aaKnown RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 EML6Q6ZMW3 1958 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 ANKHD1Q8IWZ3 2542 aaKnown RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 EEF1E1-BLOC1S5C9J1V9 151 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 NPIPB8E9PQR5 432 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 PLOD2O00469 737 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 SIAH2O43255 324 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 EEF1E1O43324 174 aaKnown RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 BCAS2O75934 225 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 IGKV1D-16P01601 117 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 HRGP04196 525 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 SHBGP04278 402 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 JUNP05412 331 aaKnown RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 ENO1P06733 434 aaKnown RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 TMIGD3P0DMS9 266 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 CYP4B1P13584 511 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 HOXB4P17483 251 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 KLK2P20151 261 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 TAC1P20366 129 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 TCEA1P23193 301 aaKnown RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 GRK2P25098 689 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 DPP4P27487 766 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 HMOX2P30519 316 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 MPIP34949 423 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 PEX19P40855 299 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 MC3RP41968 323 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 DGKQP52824 942 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 PNLIPRP2P54317 469 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 PKNOX1P55347 436 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 ACSM2AQ08AH3 577 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 FAM27E3Q08E93 113 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 C2orf80Q0P641 193 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 FOXD4Q12950 439 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 HEPACAMQ14CZ8 416 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 SF3B4Q15427 424 aaKnown RBP eCLIP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 SPIN4Q56A73 249 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 LGSNQ5TDP6 509 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 C6orf163Q5TEZ5 329 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 ACSM2BQ68CK6 577 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 ZNF474Q6S9Z5 364 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 TMEM107Q6UX40 140 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 APOOLQ6UXV4 268 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 ZYG11AQ6WRX3 759 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 LUZP2Q86TE4 346 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 MARCH3Q86UD3 253 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 LCA5Q86VQ0 697 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 IFNEQ86WN2 208 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 KRTAP1-3Q8IUG1 177 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 GSPT2Q8IYD1 628 aaKnown RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 GCNT2Q8N0V5 402 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 OR2L13Q8N349 312 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 CCNYL1Q8N7R7 359 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 ZNF454Q8N9F8 522 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 FADS6Q8N9I5 356 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 WFDC11Q8NEX6 87 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 OR5M1Q8NGP8 315 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 ACMSDQ8TDX5 336 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 MBD6Q96DN6 1003 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 STARD4Q96DR4 205 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 RMND5BQ96G75 393 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 POM121Q96HA1 1249 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 EGLN2Q96KS0 407 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 AMDHD1Q96NU7 426 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 HS3ST6Q96QI5 342 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 TM9SF2Q99805 663 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 GLIPR2Q9H4G4 154 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 GALNT8Q9NY28 637 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 MED11Q9P086 117 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 DCDC2Q9UHG0 476 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 FOXD3Q9UJU5 478 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 C19orf53Q9UNZ5 99 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 ZNF337Q9Y3M9 751 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 POLR3HQ9Y535 204 aaPredicted RBP6.35□□□□□ -1.39
HDAC3-207ENST00000475549 PTGDR2Q9Y5Y4 395 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 ACANP16112 2415 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 KIAA1549Q9HCM3 1950 aa6.35□□□□□ -1.39
HDAC3-207ENST00000475549 AKAP6Q13023 2319 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 PHF3Q92576 2039 aaKnown RBP6.34□□□□□ -1.39
HDAC3-207ENST00000475549 A0A087WV62 115 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 A0A1W2PNV4 684 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 GXYLT2A0PJZ3 443 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 H0Y3Z8 333 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 HCRTR2O43614 444 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 PLIN3O60664 434 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 CGAP01215 116 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 PROCP04070 461 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 GSTA1P08263 222 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 CHMP24386 653 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 HOXC12P31275 282 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 EVI2BP34910 448 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms