RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 IFNA5P01569 189 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 UCHL1P09936 223 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 ZNF865P0CJ78 1059 aaPredicted RBP10.4□□□□□ -0.74
VAPB-204ENST00000475243 MAP2K3P46734 347 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 ZNF616Q08AN1 781 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 ERV3-1Q14264 604 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 RAB11BQ15907 218 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 UGT2A3Q6UWM9 527 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 C7orf43Q8WVR3 580 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 MYLIPQ8WY64 445 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 C16orf58Q96GQ5 468 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 MAELQ96JY0 434 aaKnown RBP10.4□□□□□ -0.74
VAPB-204ENST00000475243 FAM71F1Q96KD3 344 aaPredicted RBP10.4□□□□□ -0.74
VAPB-204ENST00000475243 ALOXE3Q9BYJ1 711 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.4□□□□□ -0.75
VAPB-204ENST00000475243 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.4□□□□□ -0.75
VAPB-204ENST00000475243 TVP23AA6NH52 213 aa10.4□□□□□ -0.75
VAPB-204ENST00000475243 FRS3O43559 492 aa10.4□□□□□ -0.75
VAPB-204ENST00000475243 MITFO75030 526 aaPredicted RBP10.4□□□□□ -0.75
VAPB-204ENST00000475243 FBXO45P0C2W1 286 aa10.4□□□□□ -0.75
VAPB-204ENST00000475243 RAC2P15153 192 aa10.4□□□□□ -0.75
VAPB-204ENST00000475243 CD68P34810 354 aaPredicted RBP10.4□□□□□ -0.75
VAPB-204ENST00000475243 SLC16A9Q7RTY1 509 aa10.4□□□□□ -0.75
VAPB-204ENST00000475243 CRB3Q9BUF7 120 aa10.4□□□□□ -0.75
VAPB-204ENST00000475243 C8orf33Q9H7E9 229 aaPredicted RBP10.4□□□□□ -0.75
VAPB-204ENST00000475243 MTHFD2LQ9H903 347 aaPredicted RBP10.4□□□□□ -0.75
VAPB-204ENST00000475243 UNCXA6NJT0 531 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 LCATP04180 440 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 HOXB9P17482 250 aaPredicted RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 CEBPBP17676 345 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 CDKN2CP42773 168 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 ZNF789Q5FWF6 425 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 FOXN4Q96NZ1 517 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 LPAR4Q99677 370 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 TMEM9Q9P0T7 183 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 UBQLN2Q9UHD9 624 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 ACAD8Q9UKU7 415 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 PRAMEF2O60811 474 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 DRD5P21918 477 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 GALNT1Q10472 559 aaPredicted RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 PIN1Q13526 163 aaPredicted RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 UEVLDQ8IX04 471 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 OR6C4Q8NGE1 309 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 SCRN2Q96FV2 425 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 ST6GALNAC5Q9BVH7 336 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 TMEM184CQ9NVA4 438 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 TTC3P53804 2025 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 TIMP1P01033 207 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 CD53P19397 219 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 HNRNPA2B1P22626 353 aaKnown RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 P2RY2P41231 377 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 ART1P52961 327 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 NCS1P62166 190 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 PLEKHN1Q494U1 663 aaPredicted RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 MAMDC2Q7Z304 686 aaPredicted RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 TMEM173Q86WV6 379 aaPredicted RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 MINDY1Q8N5J2 469 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 OR51T1Q8NGJ9 327 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 RHBDD1Q8TEB9 315 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 PTERQ96BW5 349 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 TEPSINQ96N21 525 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 PELOQ9BRX2 385 aaKnown RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 ZNF623O75123 536 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 HTR3BO95264 441 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 ADAP00813 363 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 ERCC1P07992 297 aaPredicted RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 BMXP51813 675 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 AKR1C2P52895 323 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 POU4F2Q12837 409 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 SCML4Q8N228 414 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 OR5AK2Q8NH90 309 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 GLYATL2Q8WU03 294 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 PCTPQ9UKL6 214 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 CSNK1G3Q9Y6M4 447 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 SLC1A7O00341 560 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 SYT7O43581 403 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 KNG1P01042 644 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 CTHP32929 405 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 NKPD1Q17RQ9 610 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 FOXJ1Q92949 421 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 ARL6Q9H0F7 186 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 ABCG5Q9H222 651 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 RANBP3Q9H6Z4 567 aaPredicted RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 C10orf71Q711Q0 1435 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 MEIS3P1A6NDR6 274 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 C17orf105B2RV13 164 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 EPHA1P21709 976 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 HTR6P50406 440 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 DSC1Q08554 894 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 MOGSQ13724 837 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 ZNF765Q7L2R6 523 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 TAS1R1Q7RTX1 841 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 OR8J1Q8NGP2 316 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 ZMYND19Q96E35 227 aaPredicted RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 KIAA0100Q14667 2235 aaKnown RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 ZNF28P17035 718 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 ENDOUP21128 410 aaKnown RBP10.39□□□□□ -0.75
VAPB-204ENST00000475243 TMBIM6P55061 237 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 OR2T4Q8NH00 348 aa10.39□□□□□ -0.75
VAPB-204ENST00000475243 IL26Q9NPH9 171 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms