RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 GNPDA2Q8TDQ7 276 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 ADAMTS18Q8TE60 1221 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 ZG16BQ96DA0 208 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 DACH2Q96NX9 599 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 GPA33Q99795 319 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.16□□□□□ -0.94
USP39-214ENST00000474572 SEMA4GQ9NTN9 838 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 CLN6Q9NWW5 311 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 KLHL28Q9NXS3 571 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 CA14Q9ULX7 337 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 WDR45Q9Y484 360 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 BRWD1Q9NSI6 2320 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 NINQ8N4C6 2090 aa9.16□□□□□ -0.94
USP39-214ENST00000474572 THADAQ6YHU6 1953 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 LAMA3Q16787 3333 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 COL5A1P20908 1838 aaPredicted RBP9.15□□□□□ -0.94
USP39-214ENST00000474572 M0R129 80 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 FOXS1O43638 330 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 MAN1A2O60476 641 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 LDB3O75112 727 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 COQ9O75208 318 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 RDH16O75452 317 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 CLPXO76031 633 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 MED26O95402 600 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 CBX7O95931 251 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 THY1P04216 161 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 EIF2S1P05198 315 aaKnown RBP9.15□□□□□ -0.94
USP39-214ENST00000474572 PROS1P07225 676 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 IGFBP1P08833 259 aaPredicted RBP9.15□□□□□ -0.94
USP39-214ENST00000474572 STSP08842 583 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 ALOX5P09917 674 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 CT62P0C5K7 136 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 TYRP1P17643 537 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 CDH3P22223 829 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 C21orf33P30042 268 aaPredicted RBP9.15□□□□□ -0.94
USP39-214ENST00000474572 TRHRP34981 398 aaPredicted RBP9.15□□□□□ -0.94
USP39-214ENST00000474572 UGT2B10P36537 528 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 IFNGR2P38484 337 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 OMPP47874 163 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 NXPH1P58417 271 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 TAS2R41P59536 307 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 TSPAN31Q12999 210 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 ZNF829Q3KNS6 432 aaPredicted RBP9.15□□□□□ -0.94
USP39-214ENST00000474572 DCST2Q5T1A1 773 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 MFSD4BQ5TF39 518 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 GARNL3Q5VVW2 1013 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 C19orf48Q6RUI8 117 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 RASSF6Q6ZTQ3 369 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 MED25Q71SY5 747 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 ZNF438Q7Z4V0 828 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 ZNF761Q86XN6 746 aaPredicted RBP9.15□□□□□ -0.94
USP39-214ENST00000474572 MCATQ8IVS2 390 aaKnown RBP9.15□□□□□ -0.94
USP39-214ENST00000474572 PEX5LQ8IYB4 626 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 TMEFF1Q8IYR6 380 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 SHISA5Q8N114 240 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 CLIP4Q8N3C7 705 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 STX19Q8N4C7 294 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 FAM26EQ8N5C1 309 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 CLDN22Q8N7P3 220 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 POGLUT1Q8NBL1 392 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 B3GNT7Q8NFL0 401 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 DYNC2LI1Q8TCX1 351 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 ACOT11Q8WXI4 607 aaPredicted RBP9.15□□□□□ -0.94
USP39-214ENST00000474572 COL26A1Q96A83 441 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 VMP1Q96GC9 406 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 TCTN2Q96GX1 697 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 Q96MT0 163 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 CCDC3Q9BQI4 270 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 LMF2Q9BU23 707 aaKnown RBP9.15□□□□□ -0.94
USP39-214ENST00000474572 OCEL1Q9H607 264 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 ANKHQ9HCJ1 492 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 PALMDQ9NP74 551 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 MRPS18AQ9NVS2 196 aaKnown RBP9.15□□□□□ -0.94
USP39-214ENST00000474572 GPR83Q9NYM4 423 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 SELENONQ9NZV5 590 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 WNT16Q9UBV4 365 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 EPHA6Q9UF33 1036 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 SLC13A4Q9UKG4 626 aa9.15□□□□□ -0.94
USP39-214ENST00000474572 ADAMTS20P59510 1910 aa9.15□□□□□ -0.95
USP39-214ENST00000474572 NUP210LQ5VU65 1888 aa9.15□□□□□ -0.95
USP39-214ENST00000474572 TDRD6O60522 2096 aaKnown RBP9.14□□□□□ -0.95
USP39-214ENST00000474572 CENPVL1A0A0U1RR11 272 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 FITM1A5D6W6 292 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 SLC9B1P1A6NJY1 282 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 SGK494L7N484 410 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 AP3D1O14617 1153 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 CHST10O43529 356 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 HRO43593 1189 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 FMO6PO60774 539 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 LYPD3O95274 346 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 SOX14O95416 240 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 NSA2O95478 260 aaKnown RBP9.14□□□□□ -0.95
USP39-214ENST00000474572 PTHP01270 115 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 DBIP07108 87 aaKnown RBP9.14□□□□□ -0.95
USP39-214ENST00000474572 CTSBP07858 339 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 ADRA2AP08913 450 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 NID1P14543 1247 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 CD36P16671 472 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 S1PR1P21453 382 aa9.14□□□□□ -0.95
USP39-214ENST00000474572 NT5EP21589 574 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms