RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 WDR25Q64LD2 544 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 DCUN1D2Q6PH85 259 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 C17orf107Q6ZR85 190 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CENPUQ71F23 418 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 OVCH1Q7RTY7 1134 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ADCK2Q7Z695 626 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ANGPTL5Q86XS5 388 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CACUL1Q86Y37 369 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CALHM1Q8IU99 346 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 PHYKPLQ8IUZ5 450 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 GLB1L2Q8IW92 636 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 DNAAF1Q8NEP3 725 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 KBTBD8Q8NFY9 601 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 NETO1Q8TDF5 533 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 DCAF4Q8WV16 495 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 RNF133Q8WVZ7 376 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 LPAR1Q92633 364 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 EXTL1Q92935 676 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 UBE2FQ969M7 185 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 THOC3Q96J01 351 aaKnown RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 CCDC3Q9BQI4 270 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 RSG1Q9BU20 258 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SIRPDQ9H106 197 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 FZD8Q9H461 694 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 NSUN3Q9H649 340 aaKnown RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 CBX8Q9HC52 389 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 OLAHQ9NV23 265 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 TMLHEQ9NVH6 421 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 C1orf109Q9NX04 203 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 BFARQ9NZS9 450 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 LRP2BPQ9P2M1 347 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MAPKBP1O60336 1514 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CCDC141Q6ZP82 1450 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CARMIL3Q8ND23 1372 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 I6L893 689 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 TP53I11O14683 189 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 LAMTOR5O43504 91 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 KLRC4O43908 158 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 TSPAN13O95857 204 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 F7P08709 466 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 ANXA3P12429 323 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 HOXB2P14652 356 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 NPPBP16860 134 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ACHEP22303 614 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 FSHRP23945 695 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CD6P30203 668 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 PTPN7P35236 360 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 IFNGR2P38484 337 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 AKR1C3P42330 323 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CYB561P49447 251 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ECH1Q13011 328 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 OR4D1Q15615 310 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 SLC22A6Q4U2R8 563 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 KHDC1Q4VXA5 237 aaKnown RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 CATSPEREQ5SY80 951 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 DHRS7BQ6IAN0 325 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 GRINAQ7Z429 371 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 GALNT10Q86SR1 603 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 TSPAN33Q86UF1 283 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 PGAM4Q8N0Y7 254 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 RNF148Q8N7C7 305 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 NECAB1Q8N987 351 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 C2CD4AQ8NCU7 369 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 OR6M1Q8NGM8 313 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 ACOT12Q8WYK0 555 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 GLT1D1Q96MS3 346 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 CMKLR1Q99788 373 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MCRIP2Q9BUT9 160 aaKnown RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 ALG12Q9BV10 488 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 HDHD5Q9BXW7 423 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MIR1-1HGQ9H1L0 117 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 MTHFD2LQ9H903 347 aaPredicted RBP3.27□□□□□ -1.89
UBR3-208ENST00000474426 LRWD1Q9UFC0 647 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 PADI3Q9ULW8 664 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 STUB1Q9UNE7 303 aa3.27□□□□□ -1.89
UBR3-208ENST00000474426 C5orf52A6NGY3 159 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 IMPA2O14732 288 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 TGOLN2O43493 480 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SOX15O60248 233 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 MRPS14O60783 128 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 LATS1O95835 1130 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 RPN2P04844 631 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SERPINE2P07093 398 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ANXA2P07355 339 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 ALPIP09923 528 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SRFP11831 508 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 TYRP14679 529 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 GABRA1P14867 456 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 NME1P15531 152 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 IMPDH1P20839 514 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 HTR5AP47898 357 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 VEGFBP49765 207 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SLC37A1P57057 533 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ABCE1P61221 599 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 ERVK11-1P61568 191 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 IFITM3Q01628 133 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 ELAVL2Q12926 359 aaKnown RBP3.26□□□□□ -1.89
UBR3-208ENST00000474426 CAMK1Q14012 370 aa3.26□□□□□ -1.89
UBR3-208ENST00000474426 SLBPQ14493 270 aaKnown RBP eCLIP3.26□□□□□ -1.89
UBR3-208ENST00000474426 SF3A2Q15428 464 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms