RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 FRMPD3Q5JV73 1810 aa5.71□□□□□ -1.5
SMARCE1-208ENST00000474246 ZZEF1O43149 2961 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 A0A1B0GV72 72 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 TMEM213A2RRL7 107 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 MBD3L4A6NDZ8 208 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 MBD3L3A6NE82 208 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 NPEPPSL1A6NEC2 478 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 LOC110117498-PIK3R3F6TDL0 507 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 TM4SF5O14894 197 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 AQP9O43315 295 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 ADAP1O75689 374 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 ABHD16AO95870 558 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 CST4P01036 141 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 GHRHP01286 108 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 EPOP01588 193 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 IFNA4P05014 189 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 S100A8P05109 93 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 CRYGBP07316 175 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 NBEAP1P0C6P0 100 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 FDXRP22570 491 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 MMP8P22894 467 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 DCKP27707 260 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 PRDX5P30044 214 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 MAP2K3P46734 347 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 RFX5P48382 616 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 MRPL19P49406 292 aaKnown RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 SEC61GP60059 68 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 ERVK-25P63136 954 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 BLOC1S1P78537 153 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 MRPS22P82650 360 aaKnown RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 EGR3Q06889 387 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 ABHD18Q0P651 414 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 SELPLGQ14242 412 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 CDO1Q16878 200 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 TMEM249Q2WGJ8 235 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 COX19Q49B96 90 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 ARMCX4Q5H9R4 360 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 CTSL3PQ5NE16 218 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 LCE2CQ5TA81 110 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 FAM46CQ5VWP2 391 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 REEP3Q6NUK4 255 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 ZNF544Q6NX49 715 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 LRFN4Q6PJG9 635 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 Q6ZUG5 572 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 ASB18Q6ZVZ8 466 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 TSPAN33Q86UF1 283 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 ZNF589Q86UQ0 364 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 IRF2BP1Q8IU81 584 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 C4orf19Q8IY42 314 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 METTL4Q8N3J2 472 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 MARVELD2Q8N4S9 558 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 OR5T2Q8NGG2 359 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 DYNC2LI1Q8TCX1 351 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 MAGEE2Q8TD90 523 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 GAB3Q8WWW8 586 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 GLG1Q92896 1179 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 PPP1R16AQ96I34 528 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 AKR1E2Q96JD6 320 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 KLHL15Q96M94 604 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 SFXN2Q96NB2 322 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 MCCC1Q96RQ3 725 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 CD180Q99467 661 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 SYT15Q9BQS2 421 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 DDX31Q9H8H2 851 aaKnown RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 GPN2Q9H9Y4 310 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 KRCC1Q9NPI7 259 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 PXMP2Q9NR77 195 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 IL17BQ9UHF5 180 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 MRM2Q9UI43 246 aaKnown RBP5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 ICKQ9UPZ9 632 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 PSG11Q9UQ72 335 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 AUP1Q9Y679 476 aa5.7□□□□□ -1.5
SMARCE1-208ENST00000474246 TRAV26-1A0A087WT03 109 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 A0A1W2PRX2 142 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 MAGEA13PA6NCF6 341 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 EVPLLA8MZ36 301 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 H3BN98 237 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 KLF11O14901 512 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 ARPC5O15511 151 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 CYP26A1O43174 497 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 PRKYO43930 277 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 PRSS23O95084 383 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 MOCS3O95396 460 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 H6PDO95479 791 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 ACSL3O95573 720 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 LY86O95711 162 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 RAF1P04049 648 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 RPN2P04844 631 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 CDK1P06493 297 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 CHRNGP07510 517 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 SPINK2P20155 84 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 CD22P20273 847 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 TIA1P31483 386 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 SLC6A4P31645 630 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 HNRNPH3P31942 346 aaKnown RBP5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 CD68P34810 354 aaPredicted RBP5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 UGT2B10P36537 528 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 DNA2P51530 1060 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 GALK1P51570 392 aa5.69□□□□□ -1.5
SMARCE1-208ENST00000474246 TMEM33P57088 247 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms