RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 PRR35P0CG20 571 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 NHLRC4P0CG21 123 aaPredicted RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 SLC2A4P14672 509 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 COX6B1P14854 86 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 NCK1P16333 377 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 VCLP18206 1134 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 CD9P21926 228 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 LHCGRP22888 699 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 IL12AP29459 219 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 ALDH4A1P30038 563 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 AKT1P31749 480 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 UQCRC1P31930 480 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 GSK3BP49841 420 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 POLR2JP52435 117 aaKnown RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 OR1D5P58170 312 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 NAA20P61599 178 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 ERVK-8P63133 956 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 CDKL1Q00532 357 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 PLIN5Q00G26 463 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 MC1RQ01726 317 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 LIPEQ05469 1076 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 ZFP36L1Q07352 338 aaKnown RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 TRAP1Q12931 704 aaKnown RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 TRAF3Q13114 568 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 SGCGQ13326 291 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 MED21Q13503 144 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 PMS2P11Q13670 270 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 PHKG1Q16816 387 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 MPEG1Q2M385 716 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 ATP13A5Q4VNC0 1218 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 ATP6AP1LQ52LC2 224 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 MTX3Q5HYI7 312 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 PAGE3Q5JUK9 113 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 C6orf136Q5SQH8 315 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 MPP7Q5T2T1 576 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 C6orf52Q5T4I8 152 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 GPRC6AQ5T6X5 926 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 FCRLBQ6BAA4 426 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 OR52E8Q6IFG1 317 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 C8orf82Q6P1X6 216 aaPredicted RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 SLC2A7Q6PXP3 512 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 SBSNQ6UWP8 590 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 ZNF517Q6ZMY9 492 aaPredicted RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 MACC1Q6ZN28 852 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 ARPINQ7Z6K5 226 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 IFNEQ86WN2 208 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 ST13P4Q8IZP2 240 aaPredicted RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 CATSPER1Q8NEC5 780 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 OR4F6Q8NGB9 312 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 SKA2Q8WVK7 121 aaPredicted RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 TSACCQ96A04 125 aaPredicted RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 TMEM159Q96B96 161 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 SLCO4A1Q96BD0 722 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 ULK4Q96C45 1275 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 ROPN1LQ96C74 230 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 LRRC58Q96CX6 371 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 ASB9Q96DX5 294 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 PDLIM5Q96HC4 596 aaKnown RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 TEX37Q96LM6 180 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 CNBD2Q96M20 576 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 PRR25Q96S07 402 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 GPATCH1Q9BRR8 931 aaKnown RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 TMEM79Q9BSE2 394 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 SLC17A9Q9BYT1 436 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 TWSG1Q9GZX9 223 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 Q9H521 79 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 PFDN4Q9NQP4 134 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 SDR39U1Q9NRG7 319 aaPredicted RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 OCIAD1Q9NX40 245 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 PDP2Q9P2J9 529 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 OPTCQ9UBM4 332 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 KLQ9UEF7 1012 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 CD84Q9UIB8 345 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 LEF1Q9UJU2 399 aaPredicted RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 APPL1Q9UKG1 709 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 USP22Q9UPT9 525 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 RNF11Q9Y3C5 154 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 OARD1Q9Y530 152 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 AP4B1Q9Y6B7 739 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 V9GYQ6 96 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 MN1Q10571 1320 aaPredicted RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 PRRC2AP48634 2157 aaKnown RBP4.88□□□□□ -1.63
FN1-219ENST00000474036 DOCK10Q96BY6 2186 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 CSPG4Q6UVK1 2322 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 CNTRLQ7Z7A1 2325 aa4.88□□□□□ -1.63
FN1-219ENST00000474036 IGHV5-10-1A0A0J9YXX1 117 aa4.87□□□□□ -1.63
FN1-219ENST00000474036 A0A1W2PP18 115 aa4.87□□□□□ -1.63
FN1-219ENST00000474036 KRT87PA6NCN2 255 aa4.87□□□□□ -1.63
FN1-219ENST00000474036 AP4M1O00189 453 aa4.87□□□□□ -1.63
FN1-219ENST00000474036 INPP4BO15327 924 aa4.87□□□□□ -1.63
FN1-219ENST00000474036 EEDO75530 441 aaKnown RBP4.87□□□□□ -1.63
FN1-219ENST00000474036 POP4O95707 220 aaKnown RBP4.87□□□□□ -1.63
FN1-219ENST00000474036 OTCP00480 354 aa4.87□□□□□ -1.63
FN1-219ENST00000474036 CTSLP07711 333 aa4.87□□□□□ -1.63
FN1-219ENST00000474036 CD99P14209 185 aa4.87□□□□□ -1.63
FN1-219ENST00000474036 NELFEP18615 380 aaKnown RBP4.87□□□□□ -1.63
FN1-219ENST00000474036 FPR3P25089 353 aa4.87□□□□□ -1.63
FN1-219ENST00000474036 PRKAR1BP31321 381 aa4.87□□□□□ -1.63
FN1-219ENST00000474036 CSTF2P33240 577 aaKnown RBP eCLIP4.87□□□□□ -1.63
FN1-219ENST00000474036 DLSTP36957 453 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms