RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 HMGN2P05204 90 aaKnown RBP12.62□□□□□ -0.39
USF1-205ENST00000473969 IL6P05231 212 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 CASP3P42574 277 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 IDH3AP50213 366 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 HBA1P69905 142 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 LASP1Q14847 261 aaKnown RBP12.62□□□□□ -0.39
USF1-205ENST00000473969 SLC10A1Q14973 349 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 SPANXN4Q5MJ08 99 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 MFSD12Q6NUT3 480 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 WDR53Q7Z5U6 358 aaPredicted RBP12.62□□□□□ -0.39
USF1-205ENST00000473969 FAM109AQ8N4B1 249 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 TRIML2Q8N7C3 387 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 COX18Q8N8Q8 333 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 PSMA8Q8TAA3 256 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 HGDQ93099 445 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 EFHD2Q96C19 240 aaPredicted RBP12.62□□□□□ -0.39
USF1-205ENST00000473969 RMND5BQ96G75 393 aaPredicted RBP12.62□□□□□ -0.39
USF1-205ENST00000473969 SLC35A4Q96G79 324 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 MARK4Q96L34 752 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 RILPQ96NA2 401 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 SIKE1Q9BRV8 207 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 YIPF4Q9BSR8 244 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 OSBPL11Q9BXB4 747 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 ANGPTL4Q9BY76 406 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 DEFB127Q9H1M4 99 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 LDAHQ9H6V9 325 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 EXO5Q9H790 373 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 CXorf36Q9H7Y0 433 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 SIRT3Q9NTG7 399 aaPredicted RBP12.62□□□□□ -0.39
USF1-205ENST00000473969 ZIM2Q9NZV7 527 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 PRAMEF25A6NGN4 478 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 ANKRD28O15084 1053 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 TSPAN2O60636 221 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 EDF1O60869 148 aaKnown RBP12.61□□□□□ -0.39
USF1-205ENST00000473969 PDE9AO76083 593 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 AGFG2O95081 481 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 NKX2-2O95096 273 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 VIMP08670 466 aaKnown RBP12.61□□□□□ -0.39
USF1-205ENST00000473969 TROVE2P10155 538 aaKnown RBP eCLIP12.61□□□□□ -0.39
USF1-205ENST00000473969 ABOP16442 354 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 GDF1P27539 372 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 TOMM20Q15388 145 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 RNFT1Q5M7Z0 435 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 TMEM81Q6P7N7 255 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 ANKRD46Q86W74 232 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 SIAH3Q8IW03 269 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 CLECL1Q8IZS7 167 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 TMEM251Q8N6I4 163 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 OR4N2Q8NGD1 307 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 OR52N2Q8NGI0 321 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 OR1J4Q8NGS1 313 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 OR5AK3PQ8NH89 298 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 FBXO30Q8TB52 745 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 PIK3R3Q92569 461 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 OR52E6Q96RD3 313 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 NODALQ96S42 347 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 ACTRT3Q9BYD9 372 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 RMND5AQ9H871 391 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 NPHS2Q9NP85 383 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 SDHAF3Q9NRP4 125 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 TRIM33Q9UPN9 1127 aa12.61□□□□□ -0.39
USF1-205ENST00000473969 TRGV8A0A0C4DH27 118 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 RNF103-CHMP3A0A140T963 221 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 DUXAA6NLW8 204 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 PRRG2O14669 202 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 GNB5O14775 395 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 ICOSLGO75144 302 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 TRAPPC6AO75865 159 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 GLSO94925 669 aaPredicted RBP12.6□□□□□ -0.39
USF1-205ENST00000473969 IL33O95760 270 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 PGRP06401 933 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 HPGDP15428 266 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 ATP6V1C1P21283 382 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 MATN1P21941 496 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 UQCRC2P22695 453 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 ELAVL4P26378 380 aaKnown RBP12.6□□□□□ -0.39
USF1-205ENST00000473969 CHI3L1P36222 383 aaPredicted RBP12.6□□□□□ -0.39
USF1-205ENST00000473969 MAGEA5P43359 124 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 DGKQP52824 942 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 WNT3P56703 355 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 IRX1P78414 480 aaPredicted RBP12.6□□□□□ -0.39
USF1-205ENST00000473969 POU6F2P78424 691 aaPredicted RBP12.6□□□□□ -0.39
USF1-205ENST00000473969 FOXO1Q12778 655 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 HYAL4Q2M3T9 481 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 CMPK2Q5EBM0 449 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 BICRALQ6AI39 1079 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 CDC73Q6P1J9 531 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 ARHGAP11AQ6P4F7 1023 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 C6orf120Q7Z4R8 191 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 FAM26EQ8N5C1 309 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 SLC16A11Q8NCK7 471 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 THOC1Q96FV9 657 aaKnown RBP12.6□□□□□ -0.39
USF1-205ENST00000473969 C16orf58Q96GQ5 468 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 TMEM41AQ96HV5 264 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 SLC35G5Q96KT7 338 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 TEX37Q96LM6 180 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 PANX1Q96RD7 426 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 STACQ99469 402 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 EBF4Q9BQW3 602 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 G6PC3Q9BUM1 346 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms