RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 BBS10Q8TAM1 723 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 POF1BQ8WVV4 589 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 SENP5Q96HI0 755 aaPredicted RBP19.81■□□□□ 0.76
COL18A1-207ENST00000473212 SLC38A2Q96QD8 506 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 OSGEPL1Q9H4B0 414 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 WASH6PQ9NQA3 447 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 MDC1Q14676 2089 aaKnown RBP19.81■□□□□ 0.76
COL18A1-207ENST00000473212 FAM240BA0A1B0GVZ2 78 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 ERVH48-1M5A8F1 160 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 PRKAR1AP10644 381 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 ERGP11308 486 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 TAS2R41P59536 307 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 MLF2Q15773 248 aaPredicted RBP19.81■□□□□ 0.76
COL18A1-207ENST00000473212 MZT2BQ6NZ67 158 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 ZFAND1Q8TCF1 268 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 FAM46AQ96IP4 442 aaKnown RBP19.81■□□□□ 0.76
COL18A1-207ENST00000473212 SPATA5L1Q9BVQ7 753 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 POLMQ9NP87 494 aaPredicted RBP19.81■□□□□ 0.76
COL18A1-207ENST00000473212 MBNL1Q9NR56 388 aaKnown RBP19.81■□□□□ 0.76
COL18A1-207ENST00000473212 KLHL21Q9UJP4 597 aa19.81■□□□□ 0.76
COL18A1-207ENST00000473212 LYRM1O43325 122 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 CHRNB1P11230 501 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 CELP19835 753 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 ERP29P30040 261 aaKnown RBP19.8■□□□□ 0.76
COL18A1-207ENST00000473212 IL12RB1P42701 662 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 EVX1P49640 407 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 KHKP50053 298 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 CDH11P55287 796 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 SNRPNP63162 240 aaKnown RBP19.8■□□□□ 0.76
COL18A1-207ENST00000473212 GAB4Q2WGN9 574 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 C18orf63Q68DL7 685 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 OR4C11Q6IEV9 310 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 TMEM107Q6UX40 140 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 PEX5LQ8IYB4 626 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 TRIM63Q969Q1 353 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 UPRTQ96BW1 309 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 ATG4BQ9Y4P1 393 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 A0A0A6YYD5 115 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 KDM4EB2RXH2 506 aaPredicted RBP19.8■□□□□ 0.76
COL18A1-207ENST00000473212 TNFRSF10AO00220 468 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 DVL2O14641 736 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 VEGFDO43915 354 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 FGBP02675 491 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 WASP42768 502 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 GPLD1P80108 840 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 CDK3Q00526 305 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 WSCD2Q2TBF2 565 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 LYPD8Q6UX82 237 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 ERN2Q76MJ5 926 aaKnown RBP19.8■□□□□ 0.76
COL18A1-207ENST00000473212 VRK2Q86Y07 508 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 ETFBKMTQ8IXQ9 262 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 NEIL3Q8TAT5 605 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 GNPDA2Q8TDQ7 276 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 CNRIP1Q96F85 164 aaPredicted RBP19.8■□□□□ 0.76
COL18A1-207ENST00000473212 ZC3HAV1LQ96H79 300 aaKnown RBP19.8■□□□□ 0.76
COL18A1-207ENST00000473212 COX14Q96I36 57 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 SLC35C2Q9NQQ7 365 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 MRPS23Q9Y3D9 190 aaKnown RBP19.8■□□□□ 0.76
COL18A1-207ENST00000473212 PCDHGB7Q9Y5F8 929 aa19.8■□□□□ 0.76
COL18A1-207ENST00000473212 C2orf92A0A1B0GVN3 265 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 CPSF4LA6NMK7 179 aaKnown RBP19.79■□□□□ 0.76
COL18A1-207ENST00000473212 PROM1O43490 865 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 NARSO43776 548 aaKnown RBP19.79■□□□□ 0.76
COL18A1-207ENST00000473212 FAM157BP0CG42 384 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 ACP5P13686 325 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 HTR2BP41595 481 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 MLC1Q15049 377 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 FAM46CQ5VWP2 391 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 METRNLQ641Q3 311 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 SLC30A6Q6NXT4 461 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 B3GLCTQ6Y288 498 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 ZNF765Q7L2R6 523 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 MRGPREQ86SM8 312 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 ARIH2OSQ8N7S6 290 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 DUSP18Q8NEJ0 188 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 SUN3Q8TAQ9 357 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 CXorf40AQ8TE69 158 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 BBS4Q96RK4 519 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 TMEM43Q9BTV4 400 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 GON7Q9BXV9 100 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 BCL2L10Q9HD36 194 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 TMA7Q9Y2S6 64 aaKnown RBP19.79■□□□□ 0.76
COL18A1-207ENST00000473212 SPTBN5Q9NRC6 3674 aaKnown RBP19.79■□□□□ 0.76
COL18A1-207ENST00000473212 A0A0G2JMP0 313 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 LOC102723532A0A0G2JNH3 316 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 LRIT2A6NDA9 550 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 CD8B2A6NJW9 211 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 SMLR1H3BR10 107 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 GABRPO00591 440 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 ZNF780AO75290 641 aaPredicted RBP19.79■□□□□ 0.76
COL18A1-207ENST00000473212 CD8BP10966 210 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 GZMKP49863 264 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 CTBP2P56545 445 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 ELAVL3Q14576 367 aaKnown RBP19.79■□□□□ 0.76
COL18A1-207ENST00000473212 ZNF791Q3KP31 576 aaPredicted RBP19.79■□□□□ 0.76
COL18A1-207ENST00000473212 KIAA1161Q6NSJ0 714 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 LRRTM4Q86VH4 590 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 GFM1Q96RP9 751 aaKnown RBP19.79■□□□□ 0.76
COL18A1-207ENST00000473212 IRF2BPLQ9H1B7 796 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 C6orf106Q9H6K1 298 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms