RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 B3GAT2Q9NPZ5 323 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 CRTAC1Q9NQ79 661 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 HPF1Q9NWY4 346 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 FAM120CQ9NX05 1096 aaKnown RBP9.52□□□□□ -0.89
APTX-216ENST00000472896 GPRC5BQ9NZH0 403 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 KCNK7Q9Y2U2 307 aa9.52□□□□□ -0.89
APTX-216ENST00000472896 LAMA5O15230 3695 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 A0A087WV48 116 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 SERTM1A2A2V5 107 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 MPTX1A8MV57 137 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 HHLA1C9JL84 531 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 TLR4O00206 839 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 FFAR2O15552 330 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 OR1I1O60431 355 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 MMP20O60882 483 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 ENTPD6O75354 484 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 PAGE1O75459 146 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 DKK1O94907 266 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 APOL3O95236 402 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 IFNA14P01570 189 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 APOC1P02654 83 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 HBQ1P09105 142 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 SULT1A3P0DMM9 295 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 SULT1A4P0DMN0 295 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 HOXB2P14652 356 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 TGM4P49221 684 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 AGFG1P52594 562 aaKnown RBP9.51□□□□□ -0.89
APTX-216ENST00000472896 ZNF140P52738 457 aaPredicted RBP9.51□□□□□ -0.89
APTX-216ENST00000472896 POLR2GP62487 172 aaKnown RBP eCLIP9.51□□□□□ -0.89
APTX-216ENST00000472896 HMGCS1Q01581 520 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 CDH18Q13634 790 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 TPBGQ13641 420 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 DOC2BQ14184 412 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 ZNF648Q5T619 568 aaPredicted RBP9.51□□□□□ -0.89
APTX-216ENST00000472896 LRFN4Q6PJG9 635 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 KRT74Q7RTS7 529 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 TMEM25Q86YD3 366 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 TMEM86AQ8N2M4 240 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 OR8D4Q8NGM9 314 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 SPPL2AQ8TCT8 520 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 SETD7Q8WTS6 366 aaKnown RBP9.51□□□□□ -0.89
APTX-216ENST00000472896 PIH1D2Q8WWB5 315 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 SLC39A7Q92504 469 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 CMTM7Q96FZ5 175 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 FUBP3Q96I24 572 aaKnown RBP eCLIP9.51□□□□□ -0.89
APTX-216ENST00000472896 FCRL2Q96LA5 508 aaPredicted RBP9.51□□□□□ -0.89
APTX-216ENST00000472896 COQ10AQ96MF6 247 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 SLC38A2Q96QD8 506 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 PANX1Q96RD7 426 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 NPAS1Q99742 590 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 ATF6BQ99941 703 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 RLIMQ9NVW2 624 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 KCMF1Q9P0J7 381 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 MARK1Q9P0L2 795 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 COMMD3Q9UBI1 195 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 OARD1Q9Y530 152 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 PCDHB11Q9Y5F2 797 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 NPTNQ9Y639 398 aa9.51□□□□□ -0.89
APTX-216ENST00000472896 NYNRINQ9P2P1 1898 aaKnown RBP9.51□□□□□ -0.89
APTX-216ENST00000472896 TRDV1A0A1B0GX56 115 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 SLC22A23A1A5C7 686 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 PIPSLA2A3N6 862 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 SMAD6O43541 496 aaKnown RBP9.5□□□□□ -0.89
APTX-216ENST00000472896 HPGDSO60760 199 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 RAB36O95755 333 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 ADH1CP00326 375 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 TP53P04637 393 aaPredicted RBP9.5□□□□□ -0.89
APTX-216ENST00000472896 UGT2B7P16662 529 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 ITGALP20701 1170 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 PRPS1L1P21108 318 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 ITPKBP27987 946 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 NTSR1P30989 418 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 TRIM23P36406 574 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 GSTM5P46439 218 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 BDKRB1P46663 353 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 LIMS1P48059 325 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 CDH12P55289 794 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 MAXP61244 160 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 DHODHQ02127 395 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 IL10RBQ08334 325 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 MAP4K2Q12851 820 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 TAF10Q12962 218 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 P2RY14Q15391 338 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 TAF1AQ15573 450 aaPredicted RBP9.5□□□□□ -0.89
APTX-216ENST00000472896 ARTNQ5T4W7 220 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 LIPKQ5VXJ0 399 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 C12orf73Q69YU5 71 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 USP30Q70CQ3 517 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 GPRIN1Q7Z2K8 1008 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 TSEN54Q7Z6J9 526 aaKnown RBP9.5□□□□□ -0.89
APTX-216ENST00000472896 STK40Q8N2I9 435 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 BAHD1Q8TBE0 780 aaPredicted RBP9.5□□□□□ -0.89
APTX-216ENST00000472896 TM9SF4Q92544 642 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 YIPF5Q969M3 257 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 RFT1Q96AA3 541 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 OTULINQ96BN8 352 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 H2AFJQ9BTM1 129 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 HDHD2Q9H0R4 259 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 CHST8Q9H2A9 424 aa9.5□□□□□ -0.89
APTX-216ENST00000472896 DLL4Q9NR61 685 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms