RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SIRT6Q8N6T7 355 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 C11orf65Q8NCR3 313 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 NUBPLQ8TB37 319 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 THAP4Q8WY91 577 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 THOC3Q96J01 351 aaKnown RBP17.74■□□□□ 0.43
PSPC1-203ENST00000471658 FER1L6-AS2Q96M78 137 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 SDF2Q99470 211 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 BTBD2Q9BX70 525 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 Q9N2J8 555 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 ATP13A2Q9NQ11 1180 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 EXD2Q9NVH0 621 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 P2RX2Q9UBL9 471 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 CBLCQ9ULV8 474 aa17.74■□□□□ 0.43
PSPC1-203ENST00000471658 FRG2CA6NGY1 282 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 FCMRO60667 390 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 AQP1P29972 269 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 DCAF7P61962 342 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 DEFB109BQ30KR1 87 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 ARHGAP11BQ3KRB8 267 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 ATAD3BQ5T9A4 648 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 B3GNTL1Q67FW5 361 aaPredicted RBP17.73■□□□□ 0.43
PSPC1-203ENST00000471658 DESI1Q6ICB0 168 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 HMGN2P46Q86SG4 172 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 BCORP1Q8N888 145 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 OR5L2Q8NGL0 311 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 BRIX1Q8TDN6 353 aaKnown RBP17.73■□□□□ 0.43
PSPC1-203ENST00000471658 PSMF1Q92530 271 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 TMBIM1Q969X1 311 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 SPATA9Q9BWV2 254 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 CDCP1Q9H5V8 836 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 MYOTQ9UBF9 498 aa17.73■□□□□ 0.43
PSPC1-203ENST00000471658 TAF4O00268 1085 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 GSTA4O15217 222 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 H6PDO95479 791 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 NADKO95544 446 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-203ENST00000471658 AGR2O95994 175 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 ITPKBP27987 946 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 PCGF2P35227 344 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 PIGAP37287 484 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 TXNL4AP83876 142 aaKnown RBP17.72■□□□□ 0.43
PSPC1-203ENST00000471658 CHRNEQ04844 493 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 RBBP4Q09028 425 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 ZNF630Q2M218 657 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-203ENST00000471658 CHDHQ8NE62 594 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-203ENST00000471658 FAM110BQ8TC76 370 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 FIG4Q92562 907 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 TP53INP1Q96A56 240 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 MMADHCQ9H3L0 296 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-203ENST00000471658 THUMPD1Q9NXG2 353 aaKnown RBP17.72■□□□□ 0.43
PSPC1-203ENST00000471658 NPIPA5A0A0B4J1W7 369 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 TTC36A6NLP5 189 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 NPIPA7E9PJI5 369 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 CXCR6O00574 342 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 TO15178 435 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 OR2J2O76002 312 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 NPIPA8P0DM63 369 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 GGT1P19440 569 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 ITGA3P26006 1051 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 AIMP2Q13155 320 aaKnown RBP17.72■□□□□ 0.43
PSPC1-203ENST00000471658 TRIM25Q14258 630 aaKnown RBP17.72■□□□□ 0.43
PSPC1-203ENST00000471658 SPATS1Q496A3 300 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 CRTC2Q53ET0 693 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-203ENST00000471658 GLYATQ6IB77 296 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 ERICH5Q6P6B1 374 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 UNQ6494/PRO21346Q6UXR6 183 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 CCDC81Q6ZN84 652 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 EFHD2Q96C19 240 aaPredicted RBP17.72■□□□□ 0.43
PSPC1-203ENST00000471658 ZG16BQ96DA0 208 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 SLC38A1Q9H2H9 487 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 MKLN1Q9UL63 735 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 LIPT1Q9Y234 373 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 POMPQ9Y244 141 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 POLHQ9Y253 713 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 PCDHGB3Q9Y5G1 929 aa17.72■□□□□ 0.43
PSPC1-203ENST00000471658 A6NL46 340 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 C5orf58C9J3I9 102 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 ACOT8O14734 319 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 RRP8O43159 456 aaKnown RBP17.71■□□□□ 0.43
PSPC1-203ENST00000471658 PGM3O95394 542 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 ABCD3P28288 659 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 ERFP50548 548 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 RAPSNQ13702 412 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 FXNQ16595 210 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 CYP27C1Q4G0S4 372 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 REEP3Q6NUK4 255 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 H3F3CQ6NXT2 135 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 FRRS1Q6ZNA5 592 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 RPS19BP1Q86WX3 136 aaKnown RBP17.71■□□□□ 0.43
PSPC1-203ENST00000471658 PTRH1Q86Y79 214 aaKnown RBP17.71■□□□□ 0.43
PSPC1-203ENST00000471658 TMEM102Q8N9M5 508 aaPredicted RBP17.71■□□□□ 0.43
PSPC1-203ENST00000471658 CLEC1AQ8NC01 280 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 HIPK4Q8NE63 616 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 C17orf47Q8NEP4 570 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 TRNT1Q96Q11 434 aaKnown RBP17.71■□□□□ 0.43
PSPC1-203ENST00000471658 ING2Q9H160 280 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 CPNE5Q9HCH3 593 aa17.71■□□□□ 0.43
PSPC1-203ENST00000471658 SUCOQ9UBS9 1254 aaKnown RBP17.71■□□□□ 0.43
PSPC1-203ENST00000471658 ARPC2O15144 300 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 ITGA10O75578 1167 aa17.7■□□□□ 0.42
PSPC1-203ENST00000471658 REM1O75628 298 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms