RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 IL12AP29459 219 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 RFC3P40938 356 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 PSMD4P55036 377 aaKnown RBP14.02□□□□□ -0.17
SDC3-203ENST00000471567 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.02□□□□□ -0.17
SDC3-203ENST00000471567 SPDYE7PQ495Y7 208 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 WDR53Q7Z5U6 358 aaPredicted RBP14.02□□□□□ -0.17
SDC3-203ENST00000471567 PACS2Q86VP3 889 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 CLECL1Q8IZS7 167 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 GHDCQ8N2G8 530 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 MIER2Q8N344 545 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 OR4N2Q8NGD1 307 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 GPR151Q8TDV0 419 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 RILPQ96NA2 401 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 NODALQ96S42 347 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 ADOQ96SZ5 270 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 EBF4Q9BQW3 602 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 METTL7AQ9H8H3 244 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 ZFP64Q9NPA5 681 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 BTNL2Q9UIR0 455 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 POLEQ07864 2286 aa14.02□□□□□ -0.17
SDC3-203ENST00000471567 MYO18BQ8IUG5 2567 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 HS6ST1O60243 411 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 KCNH1O95259 989 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 IL33O95760 270 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 HMGN2P05204 90 aaKnown RBP14.01□□□□□ -0.17
SDC3-203ENST00000471567 ACP2P11117 423 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 RBPJQ06330 500 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 EIF2S3LQ2VIR3 472 aaKnown RBP14.01□□□□□ -0.17
SDC3-203ENST00000471567 CMPK2Q5EBM0 449 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 CDC73Q6P1J9 531 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 PAOXQ6QHF9 649 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 FAM109AQ8N4B1 249 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 SLC16A11Q8NCK7 471 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 OR4A15Q8NGL6 344 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 GOT1L1Q8NHS2 421 aaPredicted RBP14.01□□□□□ -0.17
SDC3-203ENST00000471567 RNF138Q8WVD3 245 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 SLC9A6Q92581 669 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 C16orf58Q96GQ5 468 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 TMEM41AQ96HV5 264 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 MARK4Q96L34 752 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 ZNF597Q96LX8 424 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 CCDC115Q96NT0 180 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 OR52E6Q96RD3 313 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 STACQ99469 402 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 ACTRT3Q9BYD9 372 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 TSPAN10Q9H1Z9 355 aaPredicted RBP14.01□□□□□ -0.17
SDC3-203ENST00000471567 CCDC134Q9H6E4 229 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 ZDHHC11Q9H8X9 412 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 DUSP22Q9NRW4 184 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 GPATCH2Q9NW75 528 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 TMEM45AQ9NWC5 275 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 QPCTLQ9NXS2 382 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 FAF1Q9UNN5 650 aaPredicted RBP14.01□□□□□ -0.17
SDC3-203ENST00000471567 EML6Q6ZMW3 1958 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 EXPH5Q8NEV8 1989 aa14.01□□□□□ -0.17
SDC3-203ENST00000471567 SPENQ96T58 3664 aaKnown RBP14.01□□□□□ -0.17
SDC3-203ENST00000471567 NUP214P35658 2090 aaPredicted RBP14□□□□□ -0.17
SDC3-203ENST00000471567 PRAMEF25A6NGN4 478 aa14□□□□□ -0.17
SDC3-203ENST00000471567 LRRC3CA6NJW4 275 aa14□□□□□ -0.17
SDC3-203ENST00000471567 FAM166BA8MTA8 275 aa14□□□□□ -0.17
SDC3-203ENST00000471567 DYNC1I1O14576 645 aa14□□□□□ -0.17
SDC3-203ENST00000471567 ICOSLGO75144 302 aa14□□□□□ -0.17
SDC3-203ENST00000471567 WISP2O76076 250 aa14□□□□□ -0.17
SDC3-203ENST00000471567 CPSF4O95639 269 aaKnown RBP14□□□□□ -0.17
SDC3-203ENST00000471567 UQCRC2P22695 453 aa14□□□□□ -0.17
SDC3-203ENST00000471567 LCN1P31025 176 aa14□□□□□ -0.17
SDC3-203ENST00000471567 SOAT1P35610 550 aa14□□□□□ -0.17
SDC3-203ENST00000471567 PTGDSP41222 190 aa14□□□□□ -0.17
SDC3-203ENST00000471567 DGKQP52824 942 aa14□□□□□ -0.17
SDC3-203ENST00000471567 KCNK10P57789 538 aa14□□□□□ -0.17
SDC3-203ENST00000471567 STX1BP61266 288 aa14□□□□□ -0.17
SDC3-203ENST00000471567 TP53BP2Q13625 1128 aa14□□□□□ -0.17
SDC3-203ENST00000471567 LASP1Q14847 261 aaKnown RBP14□□□□□ -0.17
SDC3-203ENST00000471567 DUSP5Q16690 384 aa14□□□□□ -0.17
SDC3-203ENST00000471567 BICRALQ6AI39 1079 aa14□□□□□ -0.17
SDC3-203ENST00000471567 DESI1Q6ICB0 168 aa14□□□□□ -0.17
SDC3-203ENST00000471567 MSANTD1Q6ZTZ1 278 aa14□□□□□ -0.17
SDC3-203ENST00000471567 ANKRD46Q86W74 232 aa14□□□□□ -0.17
SDC3-203ENST00000471567 TMEM251Q8N6I4 163 aa14□□□□□ -0.17
SDC3-203ENST00000471567 OR52N2Q8NGI0 321 aa14□□□□□ -0.17
SDC3-203ENST00000471567 PRR7Q8TB68 274 aa14□□□□□ -0.17
SDC3-203ENST00000471567 FAM110BQ8TC76 370 aa14□□□□□ -0.17
SDC3-203ENST00000471567 EFHD2Q96C19 240 aaPredicted RBP14□□□□□ -0.17
SDC3-203ENST00000471567 OSBPL11Q9BXB4 747 aa14□□□□□ -0.17
SDC3-203ENST00000471567 PIGUQ9H490 435 aa14□□□□□ -0.17
SDC3-203ENST00000471567 PLSCR2Q9NRY7 297 aa14□□□□□ -0.17
SDC3-203ENST00000471567 KLRF1Q9NZS2 232 aa14□□□□□ -0.17
SDC3-203ENST00000471567 B4GALT7Q9UBV7 327 aa14□□□□□ -0.17
SDC3-203ENST00000471567 PCDHGB3Q9Y5G1 929 aa14□□□□□ -0.17
SDC3-203ENST00000471567 UBR5O95071 2799 aaPredicted RBP14□□□□□ -0.17
SDC3-203ENST00000471567 ZGRF1Q86YA3 2104 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 GXYLT2A0PJZ3 443 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 FAM234BA2RU67 622 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 IGHG3P01860 377 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 STSP08842 583 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 CYP4B1P13584 511 aa13.99□□□□□ -0.17
SDC3-203ENST00000471567 ELAVL4P26378 380 aaKnown RBP13.99□□□□□ -0.17
SDC3-203ENST00000471567 MDH1P40925 334 aaKnown RBP13.99□□□□□ -0.17
SDC3-203ENST00000471567 ZFP36L2P47974 494 aaKnown RBP13.99□□□□□ -0.17
SDC3-203ENST00000471567 MASP1P48740 699 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms