RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 PLOD2O00469 737 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 SMAD7O15105 426 aaKnown RBP8.26□□□□□ -1.09
CPSF4-211ENST00000471455 PGRMC2O15173 223 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 TO15178 435 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 TP73O15350 636 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 HCRTR2O43614 444 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 TNFRSF21O75509 655 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 TNFSF13O75888 250 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 GBAP04062 536 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 ALDOAP04075 364 aaKnown RBP8.26□□□□□ -1.09
CPSF4-211ENST00000471455 KLK1P06870 262 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 FCGR2AP12318 317 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 PEPDP12955 493 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 MTHFD2P13995 350 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 POU2F1P14859 743 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 ZNF708P17019 499 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 DRD5P21918 477 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 CNTFP26441 200 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 IL12BP29460 328 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 PPICP45877 212 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 KCNJ5P48544 419 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 LHX2P50458 406 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 NEK2P51955 445 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 CCNG1P51959 295 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 GFRA1P56159 465 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 CAV1Q03135 178 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 MAP4K2Q12851 820 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 DLG1Q12959 904 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 PRICKLE4Q2TBC4 344 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 NKAPLQ5M9Q1 402 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 FRG2Q64ET8 278 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 SLC48A1Q6P1K1 146 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 GOLGA7Q7Z5G4 137 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 CREG2Q8IUH2 290 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 SAMD14Q8IZD0 417 aaPredicted RBP8.26□□□□□ -1.09
CPSF4-211ENST00000471455 OR4K17Q8NGC6 315 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 RDH11Q8TC12 318 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 TRPC4APQ8TEL6 797 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 KCTD4Q8WVF5 259 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 KLHL29Q96CT2 875 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 ERP27Q96DN0 273 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 PIK3IP1Q96FE7 263 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 PERPQ96FX8 193 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 FRG2BQ96QU4 278 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 NODALQ96S42 347 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 NAPGQ99747 312 aaPredicted RBP8.26□□□□□ -1.09
CPSF4-211ENST00000471455 ELOVL6Q9H5J4 265 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 GALNT9Q9HCQ5 603 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 KLHL28Q9NXS3 571 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 C6orf203Q9P0P8 240 aaPredicted RBP8.26□□□□□ -1.09
CPSF4-211ENST00000471455 CPSF2Q9P2I0 782 aaKnown RBP8.26□□□□□ -1.09
CPSF4-211ENST00000471455 NFU1Q9UMS0 254 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 PCDHA9Q9Y5H5 950 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 ATRQ13535 2644 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 KIAA1549Q9HCM3 1950 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 MED12Q93074 2177 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 A0A1W2PPR1 153 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 WASHC1A8K0Z3 465 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 DEFB108AA8MXU0 73 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 C16orf97H3BN30 126 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 EREGO14944 169 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 UGT2B11O75310 529 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 ERAL1O75616 437 aaKnown RBP8.25□□□□□ -1.09
CPSF4-211ENST00000471455 REM1O75628 298 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 RPLP1P05386 114 aaKnown RBP8.25□□□□□ -1.09
CPSF4-211ENST00000471455 PPP3CBP16298 524 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 DPP4P27487 766 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 UGT2B10P36537 528 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 CLDN18P56856 261 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 GPX6P59796 221 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 HMGCS1Q01581 520 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 GANABQ14697 944 aaKnown RBP8.25□□□□□ -1.09
CPSF4-211ENST00000471455 ERCC6LQ2NKX8 1250 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 GGTA1PQ4G0N0 100 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 METTL4Q8N3J2 472 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 WDSUB1Q8N9V3 476 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 OR52R1Q8NGF1 315 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 TMEM171Q8WVE6 324 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 CTHRC1Q96CG8 243 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 NXNL1Q96CM4 212 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 PGM2Q96G03 612 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 SLC35A4Q96G79 324 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 ZNF845Q96IR2 970 aaPredicted RBP8.25□□□□□ -1.09
CPSF4-211ENST00000471455 BTBD9Q96Q07 612 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 ERP44Q9BS26 406 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 SHCBP1LQ9BZQ2 653 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 STMN4Q9H169 189 aaPredicted RBP8.25□□□□□ -1.09
CPSF4-211ENST00000471455 DPH5Q9H2P9 285 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 CXorf56Q9H5V9 222 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 NOL11Q9H8H0 719 aaKnown RBP8.25□□□□□ -1.09
CPSF4-211ENST00000471455 PFDN4Q9NQP4 134 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 SDHAF3Q9NRP4 125 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 GIMAP4Q9NUV9 329 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 MAT2BQ9NZL9 334 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 EHD3Q9NZN3 535 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 STOML1Q9UBI4 398 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 DTX4Q9Y2E6 619 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 PLLPQ9Y342 182 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 RNF11Q9Y3C5 154 aa8.25□□□□□ -1.09
CPSF4-211ENST00000471455 ZNF175Q9Y473 711 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms