RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 GABRA3P34903 492 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 GPC1P35052 558 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 PCGF2P35227 344 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 SOAT1P35610 550 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 MNAT1P51948 309 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 MRPS22P82650 360 aaKnown RBP9.11□□□□□ -0.95
SF3A1-207ENST00000471342 FADDQ13158 208 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 ART3Q13508 389 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 CCNIQ14094 377 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 NNATQ16517 81 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.11□□□□□ -0.95
SF3A1-207ENST00000471342 MMEL1Q495T6 779 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 GLIPR1L2Q4G1C9 344 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 CRB2Q5IJ48 1285 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 C16orf89Q6UX73 402 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 UNQ6494/PRO21346Q6UXR6 183 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 HSDL2Q6YN16 418 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 CCDC121Q6ZUS5 278 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 APLFQ8IW19 511 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-207ENST00000471342 MICU2Q8IYU8 434 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 FBXW8Q8N3Y1 598 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 PIP4P2Q8N4L2 257 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 OR52E4Q8NGH9 312 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 KCNE4Q8WWG9 221 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 METTL21AQ8WXB1 218 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 TAMM41Q96BW9 452 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 TMEM19Q96HH6 336 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 LCORQ96JN0 433 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-207ENST00000471342 SLC35G5Q96KT7 338 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 NODALQ96S42 347 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 RASL10BQ96S79 203 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 THUMPD3Q9BV44 507 aaKnown RBP9.11□□□□□ -0.95
SF3A1-207ENST00000471342 QRSL1Q9H0R6 528 aaKnown RBP9.11□□□□□ -0.95
SF3A1-207ENST00000471342 C3orf14Q9HBI5 128 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.11□□□□□ -0.95
SF3A1-207ENST00000471342 EGFL7Q9UHF1 273 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 POMPQ9Y244 141 aa9.11□□□□□ -0.95
SF3A1-207ENST00000471342 PTPRQQ9UMZ3 2332 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 URB1O60287 2271 aaKnown RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 NSG1A0A0A6YYJ2 146 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 CLDN24A6NM45 220 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 A8MUI8 341 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 PEX12O00623 359 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 GYG2O15488 501 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 KIAA0513O60268 411 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 HNRNPCL1O60812 293 aaKnown RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 COQ9O75208 318 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 UGT2B11O75310 529 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 UGT2B17O75795 530 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 OR2J2O76002 312 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 ZFAND5O76080 213 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 OR6B1O95007 311 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 KRT75O95678 551 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 IL33O95760 270 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 FBXO45P0C2W1 286 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 DDX5P17844 614 aaKnown RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 ABCD3P28288 659 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 PGM1P36871 562 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 CRATP43155 626 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 CD97P48960 835 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 CLCN2P51788 898 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 NR0B1P51843 470 aaKnown RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 DSTNP60981 165 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 PRR5P85299 388 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 DMTNQ08495 405 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 VEZF1Q14119 521 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 ZNF141Q15928 474 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 EXT1Q16394 746 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 DUSP7Q16829 419 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 BTBD16Q32M84 506 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 LINC00303Q3SY05 128 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 SPATS1Q496A3 300 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 KLHL26Q53HC5 615 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 DCST2Q5T1A1 773 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 FIGNL1Q6PIW4 674 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 PCSK4Q6UW60 755 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 HMGN2P46Q86SG4 172 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 SLC44A2Q8IWA5 706 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 PRR22Q8IZ63 422 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 FAM13CQ8NE31 585 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 NFKBIDQ8NI38 313 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 BRIX1Q8TDN6 353 aaKnown RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 XAGE5Q8WWM1 108 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 THAP4Q8WY91 577 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 TRNT1Q96Q11 434 aaKnown RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 TREX2Q9BQ50 279 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 BTBD2Q9BX70 525 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 DENND2DQ9H6A0 471 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 GORASP2Q9H8Y8 452 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 CPNE5Q9HCH3 593 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 C19orf25Q9UFG5 118 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 BCAP29Q9UHQ4 241 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 CNOT11Q9UKZ1 510 aaKnown RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 PCDHGB4Q9UN71 923 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 CSAG2Q9Y5P2 127 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 GPC6Q9Y625 555 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 CHCHD2Q9Y6H1 151 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-207ENST00000471342 ACACAQ13085 2346 aa9.1□□□□□ -0.95
SF3A1-207ENST00000471342 ATMQ13315 3056 aa9.09□□□□□ -0.95
SF3A1-207ENST00000471342 C15orf38-AP3S2A0A0A6YYH1 394 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms