RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 EEF1A1P68104 462 aaKnown RBP15.87■□□□□ 0.13
COL7A1-208ENST00000470076 FOXF2Q12947 444 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 GAB1Q13480 694 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 EEF1A1P5Q5VTE0 462 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 PAMR1Q6UXH9 720 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 NPSR1Q6W5P4 371 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 LARP4Q71RC2 724 aaKnown RBP eCLIP15.87■□□□□ 0.13
COL7A1-208ENST00000470076 FAM9CQ8IZT9 166 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 LINC01560Q8TB33 94 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 ACMSDQ8TDX5 336 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 RNF138Q8WVD3 245 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 SFXN2Q96NB2 322 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 RBM24Q9BX46 236 aaKnown RBP15.87■□□□□ 0.13
COL7A1-208ENST00000470076 FOLH1BQ9HBA9 442 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 CLCF1Q9UBD9 225 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 FBXL2Q9UKC9 423 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 PLOD2O00469 737 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 RIPK2O43353 540 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 RAF1P04049 648 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 GSTA1P08263 222 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 ANXA4P09525 319 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-208ENST00000470076 ZNF708P17019 499 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 GRK2P25098 689 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 STARP49675 285 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 SLC44A2Q8IWA5 706 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-208ENST00000470076 OR7G2Q8NG99 324 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 INTS12Q96CB8 462 aaKnown RBP15.86■□□□□ 0.13
COL7A1-208ENST00000470076 BBS4Q96RK4 519 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 G6PC3Q9BUM1 346 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 PIGMQ9H3S5 423 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 DKKL1Q9UK85 242 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 OR10H1Q9Y4A9 318 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 TIMM22Q9Y584 194 aa15.86■□□□□ 0.13
COL7A1-208ENST00000470076 COQ9O75208 318 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 NME6O75414 186 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-208ENST00000470076 SLITRK5O94991 958 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 DDCP20711 480 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 DPP4P27487 766 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 CPA2P48052 419 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 GAS1P54826 345 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 CLDN18P56856 261 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 BTKQ06187 659 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 ZNF763Q0D2J5 394 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 BCL2A1Q16548 175 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 KRTAP21-3Q3LHN1 58 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 SPDYAQ5MJ70 313 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 OR5M10Q6IEU7 315 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 LUZP2Q86TE4 346 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 GRAMD2AQ8IUY3 354 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 IFT20Q8IY31 132 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 EFHD2Q96C19 240 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-208ENST00000470076 CCDC126Q96EE4 140 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 DACH2Q96NX9 599 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 KCNA7Q96RP8 456 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 YIPF4Q9BSR8 244 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 EBPLQ9BY08 206 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 GSTO2Q9H4Y5 243 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 GALNT8Q9NY28 637 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 NAV3Q8IVL0 2385 aa15.85■□□□□ 0.13
COL7A1-208ENST00000470076 A0A087WV62 115 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 MYO1GB0I1T2 1018 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 GOLGA8RI6L899 631 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 HCRTR2O43614 444 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 ZIC3O60481 467 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 DIAPH2O60879 1101 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 DIO3P55073 304 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 DSCR4P56555 118 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-208ENST00000470076 NAA20P61599 178 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 PSG6Q00889 435 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 C2orf80Q0P641 193 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 ZNF155Q12901 538 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-208ENST00000470076 KEAP1Q14145 624 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 GCNT2Q8N0V5 402 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 OR4K17Q8NGC6 315 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 OR4N2Q8NGD1 307 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 PLEKHF2Q9H8W4 249 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 MID1IP1Q9NPA3 183 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 MIEF1Q9NQG6 463 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 TAS2R7Q9NYW3 318 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 PSMC3IPQ9P2W1 217 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-208ENST00000470076 DCDC2Q9UHG0 476 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 PACSIN3Q9UKS6 424 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 GRID1Q9ULK0 1009 aa15.84■□□□□ 0.13
COL7A1-208ENST00000470076 WBP11Q9Y2W2 641 aaKnown RBP15.84■□□□□ 0.13
COL7A1-208ENST00000470076 VPS13CQ709C8 3753 aa15.83■□□□□ 0.13
COL7A1-208ENST00000470076 H3BQF6 201 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 ATE1O95260 518 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 CRHP06850 196 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 PYGBP11216 843 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 EVI2BP34910 448 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 NCBP2P52298 156 aaKnown RBP eCLIP15.83■□□□□ 0.12
COL7A1-208ENST00000470076 FOXD4Q12950 439 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-208ENST00000470076 IMPG1Q17R60 797 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 CYP27C1Q4G0S4 372 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 OR2A2Q6IF42 318 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 PLXDC2Q6UX71 529 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 CCNYL1Q8N7R7 359 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 CDC26Q8NHZ8 85 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 FAM76AQ8TAV0 307 aa15.83■□□□□ 0.12
COL7A1-208ENST00000470076 MYNNQ9NPC7 610 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms