RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 MRPS26Q9BYN8 205 aaKnown RBP16.36■□□□□ 0.21
MRPL28-208ENST00000469744 REEP4Q9H6H4 257 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 PRM3Q9NNZ6 103 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 MMP25Q9NPA2 562 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 MYNNQ9NPC7 610 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 ATAD3AQ9NVI7 634 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 ANKRD10Q9NXR5 420 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 AHSPQ9NZD4 102 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 TEKT2Q9UIF3 430 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 OAZ3Q9UMX2 235 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 DOPEY1Q5JWR5 2465 aa16.36■□□□□ 0.21
MRPL28-208ENST00000469744 OR5H15A6NDH6 313 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 GABRR3A8MPY1 467 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 DLGAP1O14490 977 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 HPRP00739 348 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 ABCB1P08183 1280 aaPredicted RBP16.35■□□□□ 0.21
MRPL28-208ENST00000469744 CERS1P27544 350 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 MYBPC1Q00872 1141 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 PDE7AQ13946 482 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 H3F3CQ6NXT2 135 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 IKBIPQ70UQ0 350 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 ANKRD46Q86W74 232 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 FAM47BQ8NA70 645 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 TMEM52Q8NDY8 209 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 OR2L5Q8NG80 312 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 SSC4DQ8WTU2 575 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 RDH12Q96NR8 316 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 QRFPRQ96P65 431 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 F2RL3Q96RI0 385 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 RNF32Q9H0A6 362 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 PRDM9Q9NQV7 894 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 PNPLA3Q9NST1 481 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 DNAJB9Q9UBS3 223 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 ERRFI1Q9UJM3 462 aaPredicted RBP16.35■□□□□ 0.21
MRPL28-208ENST00000469744 DIDO1Q9BTC0 2240 aaKnown RBP16.35■□□□□ 0.21
MRPL28-208ENST00000469744 IGKV3D-11A0A0A0MRZ8 115 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 TCRBV16S1A1N1A0A5B0 115 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 B3GALT2O43825 422 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 GSNP06396 782 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 SMIM18P0DKX4 95 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 LAMP1P11279 417 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 MYF6P23409 242 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 GSTM2P28161 218 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 GSTM5P46439 218 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 MERTKQ12866 999 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 ADPRMQ3LIE5 342 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 HIST2H2BCQ6DN03 193 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 TRIM40Q6P9F5 258 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 COMMD6Q7Z4G1 85 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 NATD1Q8N6N6 113 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 BCORP1Q8N888 145 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 ST6GALNAC3Q8NDV1 305 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 GFM2Q969S9 779 aaKnown RBP16.35■□□□□ 0.21
MRPL28-208ENST00000469744 SLC47A1Q96FL8 570 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 ZNF354BQ96LW1 612 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 CSF3RQ99062 836 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 TBCDQ9BTW9 1192 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 CLK4Q9HAZ1 481 aaKnown RBP16.35■□□□□ 0.21
MRPL28-208ENST00000469744 NTN4Q9HB63 628 aa16.35■□□□□ 0.21
MRPL28-208ENST00000469744 SAMD4AQ9UPU9 718 aaKnown RBP16.35■□□□□ 0.21
MRPL28-208ENST00000469744 GNG14A0A1W2PPG7 69 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 SAGE2PA6NJ88 616 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 TGFBR3LH3BV60 316 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 UPK1AO00322 258 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 TBX19O60806 448 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 DDX5P17844 614 aaKnown RBP16.34■□□□□ 0.21
MRPL28-208ENST00000469744 PPP2R1BP30154 601 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 PMP22Q01453 160 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 VEZF1Q14119 521 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 SLC36A3Q495N2 470 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 FAM71E1Q6IPT2 247 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 RPUSD3Q6P087 351 aaKnown RBP16.34■□□□□ 0.21
MRPL28-208ENST00000469744 ABHD17CQ6PCB6 329 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 ZNF621Q6ZSS3 439 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 SVOPLQ8N434 492 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 C16orf78Q8WTQ4 265 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 PYURFQ96I23 114 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 SIGLEC12Q96PQ1 595 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 ADI1Q9BV57 179 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 HES7Q9BYE0 225 aa16.34■□□□□ 0.21
MRPL28-208ENST00000469744 SMPD3Q9NY59 655 aaPredicted RBP16.34■□□□□ 0.21
MRPL28-208ENST00000469744 MYOCOSA0A1B0GUC4 107 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 SMIM31A0A1B0GVY4 71 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 C1orf226A1L170 272 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 A1L4Q6 167 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 H0YAE9 185 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 RTCAO00442 366 aaKnown RBP16.33■□□□□ 0.2
MRPL28-208ENST00000469744 PRAMEF2O60811 474 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 RAB38P57729 211 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 TAS2R50P59544 299 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 TUBA3CQ13748 450 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 MEP1AQ16819 746 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 VMACQ2NL98 169 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 LIN52Q52LA3 116 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 TUBA3EQ6PEY2 450 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 UBE3DQ7Z6J8 389 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 ZZZ3Q8IYH5 903 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 SLC5A8Q8N695 610 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 SUN3Q8TAQ9 357 aa16.33■□□□□ 0.2
MRPL28-208ENST00000469744 FBXO30Q8TB52 745 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms