RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 ADAMTS15Q8TE58 950 aa17.87■□□□□ 0.45
VIM-203ENST00000469543 ZFPM2Q8WW38 1151 aa17.87■□□□□ 0.45
VIM-203ENST00000469543 MUTYHQ9UIF7 546 aa17.87■□□□□ 0.45
VIM-203ENST00000469543 WDFY3Q8IZQ1 3526 aa17.87■□□□□ 0.45
VIM-203ENST00000469543 SLITRK5O94991 958 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 ALPPP05187 535 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 GNSP15586 552 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 DDX5P17844 614 aaKnown RBP17.86■□□□□ 0.45
VIM-203ENST00000469543 PSMA1P25786 263 aaKnown RBP17.86■□□□□ 0.45
VIM-203ENST00000469543 CAV3P56539 151 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 ABATP80404 500 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 GPR68Q15743 365 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 C22orf42Q6IC83 251 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 BHLHB9Q6PI77 547 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 LAX1Q8IWV1 398 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 NRMQ8IXM6 262 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 OR56A1Q8NGH5 318 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 OR9Q1Q8NGQ5 310 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 OR52P1PQ8NH57 321 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 POLDIP3Q9BY77 421 aaKnown RBP17.86■□□□□ 0.45
VIM-203ENST00000469543 TESQ9UGI8 421 aaKnown RBP17.86■□□□□ 0.45
VIM-203ENST00000469543 KLF15Q9UIH9 416 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 SNX7Q9UNH6 387 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 SYNDIG1LA6NDD5 238 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 MYL12BO14950 172 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 AQP9O43315 295 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 GKN3PP0CG01 181 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 NR2F6P10588 404 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 PRG2P13727 222 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 GAS1P54826 345 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 PPP1CAP62136 330 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 PRRT3Q5FWE3 981 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 DESI1Q6ICB0 168 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 ZNF438Q7Z4V0 828 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 BBS1Q8NFJ9 593 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 ELSPBP1Q96BH3 223 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 OTULINQ96BN8 352 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 OR2A5Q96R48 311 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 SPATA5L1Q9BVQ7 753 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 MND1Q9BWT6 205 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 PINK1Q9BXM7 581 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 RACGAP1Q9H0H5 632 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 TCEAL2Q9H3H9 227 aaPredicted RBP17.86■□□□□ 0.45
VIM-203ENST00000469543 KIR3DX1Q9H7L2 352 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 TOR4AQ9NXH8 423 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 CCDC59Q9P031 241 aaKnown RBP17.86■□□□□ 0.45
VIM-203ENST00000469543 KCMF1Q9P0J7 381 aa17.86■□□□□ 0.45
VIM-203ENST00000469543 SPIN1Q9Y657 262 aaPredicted RBP17.86■□□□□ 0.45
VIM-203ENST00000469543 FAM183AA6NL82 134 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 CDC42EP2O14613 210 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 HCRTR1O43613 425 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 CTSBP07858 339 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 CPN2P22792 545 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 SOX6P35712 828 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 STXBP1P61764 594 aaKnown RBP17.85■□□□□ 0.45
VIM-203ENST00000469543 OCLNQ16625 522 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 DUSP5Q16690 384 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 AGAP7PQ5VUJ5 663 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 KIAA1324Q6UXG2 1013 aaKnown RBP17.85■□□□□ 0.45
VIM-203ENST00000469543 GDPD3Q7L5L3 318 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 ASPGQ86U10 573 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 ZBTB8BQ8NAP8 495 aaPredicted RBP17.85■□□□□ 0.45
VIM-203ENST00000469543 TMEM52Q8NDY8 209 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 FLCNQ8NFG4 579 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 OR4F15Q8NGB8 312 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 FLVCR1-AS1Q8TAF5 88 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 PIK3R3Q92569 461 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 DIO2Q92813 273 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 RMI1Q9H9A7 625 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 C3orf14Q9HBI5 128 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 OR6C2Q9NZP2 312 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 SLC13A4Q9UKG4 626 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 TICRRQ7Z2Z1 1910 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 OR6C74A6NCV1 312 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 LOC110117498-PIK3R3F6TDL0 507 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 TAF4O00268 1085 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 CCNYL3P0C7X3 344 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 LSSP48449 732 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 GPR18Q14330 331 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 MAPK14Q16539 360 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 SPANXN2Q5MJ10 180 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 RRM2BQ7LG56 351 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 RNFT2Q96EX2 444 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 MRGPRX1Q96LB2 322 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 OR2A14Q96R47 310 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 DCLRE1CQ96SD1 692 aaKnown RBP17.85■□□□□ 0.45
VIM-203ENST00000469543 ANKMY1Q9P2S6 941 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 CFL2Q9Y281 166 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 GUCY1B2O75343 617 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 CDRT1O95170 752 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 LALBAP00709 142 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 OMPP47874 163 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 RGS8P57771 180 aaPredicted RBP17.85■□□□□ 0.45
VIM-203ENST00000469543 PRKCDQ05655 676 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 COX10Q12887 443 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 SLC27A4Q6P1M0 643 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 TMEM92Q6UXU6 159 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 FRRS1Q6ZNA5 592 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 NRROSQ86YC3 692 aa17.85■□□□□ 0.45
VIM-203ENST00000469543 GALNT12Q8IXK2 581 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms