RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RALGAPA1Q6GYQ0 2036 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 EIF4E1BA6NMX2 242 aaKnown RBP17.63■□□□□ 0.41
SMC4-209ENST00000468653 PRR33A8MZF0 331 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 M0R3H8 397 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 FGF5P12034 268 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 CD59P13987 128 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 CAPGP40121 348 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 PSG6Q00889 435 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 SLC36A3Q495N2 470 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 FIGNL1Q6PIW4 674 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 NAXDQ8IW45 347 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 CHERPQ8IWX8 916 aaKnown RBP17.63■□□□□ 0.41
SMC4-209ENST00000468653 ZNF619Q8N2I2 560 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 OR7G1Q8NGA0 311 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 OR4D11Q8NGI4 311 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 RMND5BQ96G75 393 aaPredicted RBP17.63■□□□□ 0.41
SMC4-209ENST00000468653 SENP5Q96HI0 755 aaPredicted RBP17.63■□□□□ 0.41
SMC4-209ENST00000468653 VSTM2LQ96N03 204 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 EDEM2Q9BV94 578 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 ANKRD60Q9BZ19 345 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 UBAP1Q9NZ09 502 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 PRODH2Q9UF12 536 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 TCRBV16S1A1N1A0A5B0 115 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 MAGEA13PA6NCF6 341 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 TNFRSF10AO00220 468 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 SYT5O00445 386 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 POLR1CO15160 346 aaPredicted RBP17.63■□□□□ 0.41
SMC4-209ENST00000468653 GADD45GO95257 159 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 PRKAR1BP31321 381 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 RAD23AP54725 363 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 EPS8Q12929 822 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 GK3PQ14409 553 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 LARS2Q15031 903 aaKnown RBP17.63■□□□□ 0.41
SMC4-209ENST00000468653 ELAVL1Q15717 326 aaKnown RBP17.63■□□□□ 0.41
SMC4-209ENST00000468653 RFX4Q33E94 735 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 CCDC157Q569K6 752 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 DHRS4L2Q6PKH6 230 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 LAPTM4BQ86VI4 370 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 COMTD1Q86VU5 262 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 RBM45Q8IUH3 476 aaKnown RBP17.63■□□□□ 0.41
SMC4-209ENST00000468653 LACC1Q8IV20 430 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 ZNF615Q8N8J6 731 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 ATG16L2Q8NAA4 619 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 C16orf52Q8NHV5 167 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 STT3BQ8TCJ2 826 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 GIPC3Q8TF64 312 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 PHF10Q8WUB8 498 aaKnown RBP17.63■□□□□ 0.41
SMC4-209ENST00000468653 GATA6Q92908 595 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 TGIF2Q9GZN2 237 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 TOR3AQ9H497 397 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 KLHL28Q9NXS3 571 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 RHCGQ9UBD6 479 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 C3orf18Q9UK00 162 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 PCDHGA8Q9Y5G5 932 aa17.63■□□□□ 0.41
SMC4-209ENST00000468653 EPPINO95925 133 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 IL7RP16871 459 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 IGFBP5P24593 272 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 CHN2P52757 468 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 EXOC3L2Q2M3D2 409 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 KRT80Q6KB66 452 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 TCTN3Q6NUS6 607 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 UGT2A3Q6UWM9 527 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 ZNF605Q86T29 641 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 SUMF1Q8NBK3 374 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 OR4C15Q8NGM1 316 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 WFDC6Q9BQY6 131 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 SAP130Q9H0E3 1048 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 SOX17Q9H6I2 414 aaPredicted RBP17.62■□□□□ 0.41
SMC4-209ENST00000468653 Q9N2J8 555 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 TMEM9BQ9NQ34 198 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 POLE3Q9NRF9 147 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 ACER3Q9NUN7 267 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 ZNF443Q9Y2A4 671 aaPredicted RBP17.62■□□□□ 0.41
SMC4-209ENST00000468653 DTX4Q9Y2E6 619 aa17.62■□□□□ 0.41
SMC4-209ENST00000468653 WDFY4Q6ZS81 3184 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 AGAP5A6NIR3 686 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 TTC36A6NLP5 189 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 H0YAE9 185 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 BRINP1O60477 761 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 KCNK2O95069 426 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 LYNP07948 512 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 ZGLP1P0C6A0 271 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 RORAP35398 523 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 RFX3P48380 749 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 DAPP51397 102 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 EFNA3P52797 238 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 IL1RL1Q01638 556 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 SPEM2Q0P670 501 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 FOXD4Q12950 439 aaPredicted RBP17.61■□□□□ 0.41
SMC4-209ENST00000468653 COLEC12Q5KU26 742 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 RBM44Q6ZP01 1051 aaKnown RBP17.61■□□□□ 0.41
SMC4-209ENST00000468653 SHISA6Q6ZSJ9 500 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 TAGAPQ8N103 731 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 PLPP5Q8NEB5 264 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 ZNF555Q8NEP9 628 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 PMM1Q92871 262 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 FBXL20Q96IG2 436 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 OR8D2Q9GZM6 311 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 RXFP3Q9NSD7 469 aa17.61■□□□□ 0.41
SMC4-209ENST00000468653 C14orf105Q9NVL8 296 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms