RNA–Protein interactions for RNA: ENST00000468532.5

CHKB-205, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,052 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-205ENST00000468532 ERLIN1O75477 346 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 IFI6P09912 130 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 HPCAL1P37235 193 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 NUP107P57740 925 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 ABCE1P61221 599 aaKnown RBP28.41■■■□□ 2.14
CHKB-205ENST00000468532 PMPCAQ10713 525 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 C6orf136Q5SQH8 315 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 R3HCC1LQ7Z5L2 792 aaKnown RBP28.41■■■□□ 2.14
CHKB-205ENST00000468532 WDR53Q7Z5U6 358 aaPredicted RBP28.41■■■□□ 2.14
CHKB-205ENST00000468532 FNDC5Q8NAU1 212 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 CA5BP1Q8WTZ4 195 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 RND1Q92730 232 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 TUBGCP3Q96CW5 907 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 MTERF3Q96E29 417 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 PKDREJQ9NTG1 2253 aa28.41■■■□□ 2.14
CHKB-205ENST00000468532 HNRNPRO43390 633 aaKnown RBP28.4■■■□□ 2.14
CHKB-205ENST00000468532 WDR1O75083 606 aa28.4■■■□□ 2.14
CHKB-205ENST00000468532 PNLIPRP2P54317 469 aa28.4■■■□□ 2.14
CHKB-205ENST00000468532 MANFP55145 182 aaKnown RBP28.4■■■□□ 2.14
CHKB-205ENST00000468532 ZNHIT3Q15649 155 aaPredicted RBP28.4■■■□□ 2.14
CHKB-205ENST00000468532 B3GNT6Q6ZMB0 384 aa28.4■■■□□ 2.14
CHKB-205ENST00000468532 ACAD11Q709F0 780 aa28.4■■■□□ 2.14
CHKB-205ENST00000468532 ZNF781Q8N8C0 355 aa28.4■■■□□ 2.14
CHKB-205ENST00000468532 MARVELD3Q96A59 401 aa28.4■■■□□ 2.14
CHKB-205ENST00000468532 RNF6Q9Y252 685 aa28.4■■■□□ 2.14
CHKB-205ENST00000468532 FAM215AQ9Y5M1 114 aa28.4■■■□□ 2.14
CHKB-205ENST00000468532 SCAMP2O15127 329 aaKnown RBP28.39■■■□□ 2.14
CHKB-205ENST00000468532 FRKP42685 505 aaPredicted RBP28.39■■■□□ 2.14
CHKB-205ENST00000468532 MRPS22P82650 360 aaKnown RBP28.39■■■□□ 2.14
CHKB-205ENST00000468532 PTGR1Q14914 329 aa28.39■■■□□ 2.14
CHKB-205ENST00000468532 EIPR1Q53HC9 387 aa28.39■■■□□ 2.14
CHKB-205ENST00000468532 C1orf185Q5T7R7 199 aa28.39■■■□□ 2.14
CHKB-205ENST00000468532 RTL6Q6ICC9 239 aa28.39■■■□□ 2.14
CHKB-205ENST00000468532 ASB5Q8WWX0 329 aa28.39■■■□□ 2.14
CHKB-205ENST00000468532 LMF2Q9BU23 707 aaKnown RBP28.39■■■□□ 2.14
CHKB-205ENST00000468532 Q9N2J8 555 aa28.39■■■□□ 2.14
CHKB-205ENST00000468532 EQTNQ9NQ60 294 aa28.39■■■□□ 2.14
CHKB-205ENST00000468532 SERHLQ9NQF3 203 aa28.39■■■□□ 2.14
CHKB-205ENST00000468532 ACSS1Q9NUB1 689 aaPredicted RBP28.39■■■□□ 2.14
CHKB-205ENST00000468532 ATP6V1HQ9UI12 483 aa28.39■■■□□ 2.14
CHKB-205ENST00000468532 CBLCQ9ULV8 474 aa28.39■■■□□ 2.14
CHKB-205ENST00000468532 CYP4B1P13584 511 aa28.38■■■□□ 2.13
CHKB-205ENST00000468532 DDX5P17844 614 aaKnown RBP28.38■■■□□ 2.13
CHKB-205ENST00000468532 EFNA1P20827 205 aaPredicted RBP28.38■■■□□ 2.13
CHKB-205ENST00000468532 BGNP21810 368 aa28.38■■■□□ 2.13
CHKB-205ENST00000468532 GAB1Q13480 694 aa28.38■■■□□ 2.13
CHKB-205ENST00000468532 PDCD2Q16342 344 aaPredicted RBP28.38■■■□□ 2.13
CHKB-205ENST00000468532 CYP27C1Q4G0S4 372 aa28.38■■■□□ 2.13
CHKB-205ENST00000468532 IL23RQ5VWK5 629 aa28.38■■■□□ 2.13
CHKB-205ENST00000468532 ANKRD42Q8N9B4 389 aa28.38■■■□□ 2.13
CHKB-205ENST00000468532 WDSUB1Q8N9V3 476 aa28.38■■■□□ 2.13
CHKB-205ENST00000468532 PAIP2Q9BPZ3 127 aaKnown RBP28.38■■■□□ 2.13
CHKB-205ENST00000468532 TTYH2Q9BSA4 534 aa28.38■■■□□ 2.13
CHKB-205ENST00000468532 SLC6A5Q9Y345 797 aa28.38■■■□□ 2.13
CHKB-205ENST00000468532 RAP2CQ9Y3L5 183 aa28.38■■■□□ 2.13
CHKB-205ENST00000468532 WIF1Q9Y5W5 379 aa28.38■■■□□ 2.13
CHKB-205ENST00000468532 MED12Q93074 2177 aa28.37■■■□□ 2.13
CHKB-205ENST00000468532 PRPS2P11908 318 aa28.37■■■□□ 2.13
CHKB-205ENST00000468532 GABRA1P14867 456 aa28.37■■■□□ 2.13
CHKB-205ENST00000468532 GRK2P25098 689 aa28.37■■■□□ 2.13
CHKB-205ENST00000468532 CHRNB4P30926 498 aa28.37■■■□□ 2.13
CHKB-205ENST00000468532 RPL3P39023 403 aaKnown RBP28.37■■■□□ 2.13
CHKB-205ENST00000468532 SLC1A6P48664 564 aa28.37■■■□□ 2.13
CHKB-205ENST00000468532 CRYZQ08257 329 aaKnown RBP28.37■■■□□ 2.13
CHKB-205ENST00000468532 WIPI1Q5MNZ9 446 aaPredicted RBP28.37■■■□□ 2.13
CHKB-205ENST00000468532 SZRD1Q7Z422 152 aa28.37■■■□□ 2.13
CHKB-205ENST00000468532 YRDCQ86U90 279 aaKnown RBP28.37■■■□□ 2.13
CHKB-205ENST00000468532 CCDC71Q8IV32 467 aaPredicted RBP28.37■■■□□ 2.13
CHKB-205ENST00000468532 FAM83FQ8NEG4 500 aaPredicted RBP28.37■■■□□ 2.13
CHKB-205ENST00000468532 OR7A2PQ8NGA2 310 aa28.37■■■□□ 2.13
CHKB-205ENST00000468532 PPP1R36Q96LQ0 422 aa28.37■■■□□ 2.13
CHKB-205ENST00000468532 C20orf27Q9GZN8 174 aa28.37■■■□□ 2.13
CHKB-205ENST00000468532 ARHGAP21Q5T5U3 1957 aa28.37■■■□□ 2.13
CHKB-205ENST00000468532 C19orf84I3L1E1 186 aa28.36■■■□□ 2.13
CHKB-205ENST00000468532 GLI4P10075 376 aa28.36■■■□□ 2.13
CHKB-205ENST00000468532 PRKAG1P54619 331 aa28.36■■■□□ 2.13
CHKB-205ENST00000468532 DECR1Q16698 335 aa28.36■■■□□ 2.13
CHKB-205ENST00000468532 ULK2Q8IYT8 1036 aa28.36■■■□□ 2.13
CHKB-205ENST00000468532 NUP43Q8NFH3 380 aa28.36■■■□□ 2.13
CHKB-205ENST00000468532 OR10Q1Q8NGQ4 319 aa28.36■■■□□ 2.13
CHKB-205ENST00000468532 SORT1Q99523 831 aa28.36■■■□□ 2.13
CHKB-205ENST00000468532 EPB41L3Q9Y2J2 1087 aaPredicted RBP28.36■■■□□ 2.13
CHKB-205ENST00000468532 PCDHGB3Q9Y5G1 929 aa28.36■■■□□ 2.13
CHKB-205ENST00000468532 TEX15Q9BXT5 2789 aa28.36■■■□□ 2.13
CHKB-205ENST00000468532 TTC36A6NLP5 189 aa28.35■■■□□ 2.13
CHKB-205ENST00000468532 CBR3O75828 277 aa28.35■■■□□ 2.13
CHKB-205ENST00000468532 HOXD4P09016 255 aaPredicted RBP28.35■■■□□ 2.13
CHKB-205ENST00000468532 GABRA3P34903 492 aa28.35■■■□□ 2.13
CHKB-205ENST00000468532 BEND6Q5SZJ8 279 aaPredicted RBP28.35■■■□□ 2.13
CHKB-205ENST00000468532 HHATQ5VTY9 493 aa28.35■■■□□ 2.13
CHKB-205ENST00000468532 PLCZ1Q86YW0 608 aa28.35■■■□□ 2.13
CHKB-205ENST00000468532 CEP70Q8NHQ1 597 aa28.35■■■□□ 2.13
CHKB-205ENST00000468532 RNF138Q8WVD3 245 aa28.35■■■□□ 2.13
CHKB-205ENST00000468532 TIMP4Q99727 224 aa28.35■■■□□ 2.13
CHKB-205ENST00000468532 MRTO4Q9UKD2 239 aaKnown RBP28.35■■■□□ 2.13
CHKB-205ENST00000468532 EIF3LQ9Y262 564 aaKnown RBP28.35■■■□□ 2.13
CHKB-205ENST00000468532 SNUPNO95149 360 aaKnown RBP28.34■■■□□ 2.13
CHKB-205ENST00000468532 SNRPB2P08579 225 aaKnown RBP28.34■■■□□ 2.13
CHKB-205ENST00000468532 LAMP1P11279 417 aa28.34■■■□□ 2.13
CHKB-205ENST00000468532 RFX3P48380 749 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms