RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 EPXP11678 715 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 GRK2P25098 689 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 GCKP35557 465 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 CLDN18P56856 261 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 PSG6Q00889 435 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 EFR3AQ14156 821 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 SPDYAQ5MJ70 313 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 ENPP6Q6UWR7 440 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 KIF18BQ86Y91 864 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 IFT20Q8IY31 132 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 SAMD14Q8IZD0 417 aaPredicted RBP22.2■■□□□ 1.14
PTCH1-210ENST00000468211 CDC26Q8NHZ8 85 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 INTS12Q96CB8 462 aaKnown RBP22.2■■□□□ 1.14
PTCH1-210ENST00000468211 UCN2Q96RP3 112 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 TNFRSF12AQ9NP84 129 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 GIMAP4Q9NUV9 329 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 PSMC3IPQ9P2W1 217 aaPredicted RBP22.2■■□□□ 1.14
PTCH1-210ENST00000468211 CLCF1Q9UBD9 225 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 STK38LQ9Y2H1 464 aa22.2■■□□□ 1.14
PTCH1-210ENST00000468211 MYO1GB0I1T2 1018 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 RCBTB2O95199 551 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 JUNP05412 331 aaKnown RBP22.19■■□□□ 1.14
PTCH1-210ENST00000468211 GSTA1P08263 222 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 DDCP20711 480 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 IL12BP29460 328 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 MPIP34949 423 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 PNLIPRP2P54317 469 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 B3GALT5-AS1P59052 145 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 C2orf80Q0P641 193 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 GCNT2Q8N0V5 402 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 GOT1L1Q8NHS2 421 aaPredicted RBP22.19■■□□□ 1.14
PTCH1-210ENST00000468211 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.19■■□□□ 1.14
PTCH1-210ENST00000468211 BBS4Q96RK4 519 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 FLRT3Q9NZU0 649 aa22.19■■□□□ 1.14
PTCH1-210ENST00000468211 RPH3AQ9Y2J0 694 aaPredicted RBP22.19■■□□□ 1.14
PTCH1-210ENST00000468211 PLOD2O00469 737 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 CD99P14209 185 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 ZNF708P17019 499 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 KRT20P35900 424 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 MC3RP41968 323 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 SORDQ00796 357 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 FAM71E1Q6IPT2 247 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 ZYG11AQ6WRX3 759 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 SH2D5Q6ZV89 423 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 LUZP2Q86TE4 346 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 TGIF2LYQ8IUE0 185 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 GSPT2Q8IYD1 628 aaKnown RBP22.18■■□□□ 1.14
PTCH1-210ENST00000468211 WNT2BQ93097 391 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 SFXN2Q96NB2 322 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 TM9SF2Q99805 663 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 RHOXF2Q9BQY4 288 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 RTN4RQ9BZR6 473 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 GALNT8Q9NY28 637 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 TAS2R9Q9NYW1 312 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 SENP1Q9P0U3 644 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 DCDC2Q9UHG0 476 aa22.18■■□□□ 1.14
PTCH1-210ENST00000468211 POLR3HQ9Y535 204 aaPredicted RBP22.18■■□□□ 1.14
PTCH1-210ENST00000468211 TGM6O95932 706 aa22.17■■□□□ 1.14
PTCH1-210ENST00000468211 DNASE1P24855 282 aa22.17■■□□□ 1.14
PTCH1-210ENST00000468211 DPP4P27487 766 aa22.17■■□□□ 1.14
PTCH1-210ENST00000468211 NCBP2P52298 156 aaKnown RBP eCLIP22.17■■□□□ 1.14
PTCH1-210ENST00000468211 ZNF763Q0D2J5 394 aa22.17■■□□□ 1.14
PTCH1-210ENST00000468211 ZNF155Q12901 538 aaPredicted RBP22.17■■□□□ 1.14
PTCH1-210ENST00000468211 SH2D4BQ5SQS7 431 aa22.17■■□□□ 1.14
PTCH1-210ENST00000468211 TMEM107Q6UX40 140 aa22.17■■□□□ 1.14
PTCH1-210ENST00000468211 SFXN3Q9BWM7 321 aa22.17■■□□□ 1.14
PTCH1-210ENST00000468211 RBM24Q9BX46 236 aaKnown RBP22.17■■□□□ 1.14
PTCH1-210ENST00000468211 C12orf65Q9H3J6 166 aaKnown RBP22.17■■□□□ 1.14
PTCH1-210ENST00000468211 DKKL1Q9UK85 242 aa22.17■■□□□ 1.14
PTCH1-210ENST00000468211 MRPS18CQ9Y3D5 142 aaKnown RBP22.17■■□□□ 1.14
PTCH1-210ENST00000468211 OR10H1Q9Y4A9 318 aa22.17■■□□□ 1.14
PTCH1-210ENST00000468211 FLNAP21333 2647 aaKnown RBP22.17■■□□□ 1.14
PTCH1-210ENST00000468211 CCDC151A5D8V7 595 aa22.16■■□□□ 1.14
PTCH1-210ENST00000468211 SCO2O43819 266 aa22.16■■□□□ 1.14
PTCH1-210ENST00000468211 PROCP04070 461 aa22.16■■□□□ 1.14
PTCH1-210ENST00000468211 AAGABQ6PD74 315 aa22.16■■□□□ 1.14
PTCH1-210ENST00000468211 CEP112Q8N8E3 955 aa22.16■■□□□ 1.14
PTCH1-210ENST00000468211 ZFP3Q96NJ6 502 aa22.16■■□□□ 1.14
PTCH1-210ENST00000468211 STMN4Q9H169 189 aaPredicted RBP22.16■■□□□ 1.14
PTCH1-210ENST00000468211 DSN1Q9H410 356 aa22.16■■□□□ 1.14
PTCH1-210ENST00000468211 GLIPR2Q9H4G4 154 aa22.16■■□□□ 1.14
PTCH1-210ENST00000468211 MYNNQ9NPC7 610 aa22.16■■□□□ 1.14
PTCH1-210ENST00000468211 A0A087WV62 115 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 UPK1AO00322 258 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 HCRTR2O43614 444 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 FADS1O60427 444 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 TNFSF13O75888 250 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 PSMG1O95456 288 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 MYL2P10916 166 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 KLK2P20151 261 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 CHMP24386 653 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 EVI2BP34910 448 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 GSTM5P46439 218 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 PAMR1Q6UXH9 720 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 FRMD7Q6ZUT3 714 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 TRIM46Q7Z4K8 759 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 FADS6Q8N9I5 356 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 LRRN4CLQ8ND94 238 aa22.15■■□□□ 1.14
PTCH1-210ENST00000468211 SHCBP1LQ9BZQ2 653 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms