RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	CDC123	O75794	336 aa	Predicted RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	PDE5A	O76074	875 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	WDPCP	O95876	746 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	GSN	P06396	782 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	RNF224	P0DH78	156 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	EDN3	P14138	238 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	SOAT1	P35610	550 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	FEN1	P39748	380 aa	Known RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	GZMM	P51124	257 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	OLR1	P78380	273 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	MAP4K2	Q12851	820 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	HSPB3	Q12988	150 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	SLC13A2	Q13183	592 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	TP53BP2	Q13625	1128 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	ELOA	Q14241	798 aa	Known RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	PRSS53	Q2L4Q9	553 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	ZNF630	Q2M218	657 aa	Predicted RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	SFT2D3	Q587I9	215 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	PAPD4	Q6PIY7	484 aa	Known RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	FAM180A	Q6UWF9	173 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	ZNF551	Q7Z340	670 aa	Predicted RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	MICU2	Q8IYU8	434 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	C11orf65	Q8NCR3	313 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	TSLP	Q969D9	159 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	ANKRD9	Q96BM1	317 aa	Predicted RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	CCDC124	Q96CT7	223 aa	Known RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	ELP4	Q96EB1	424 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	DUS3L	Q96G46	650 aa	Known RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	ZNF354B	Q96LW1	612 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	LPAR4	Q99677	370 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	SLX1A	Q9BQ83	275 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	CXorf36	Q9H7Y0	433 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	DCLRE1B	Q9H816	532 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	GIN1	Q9NXP7	522 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	ERVK-11	Q9UQG0	969 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	SNX8	Q9Y5X2	465 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	CNTRL	Q7Z7A1	2325 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	IGKV3D-11	A0A0A0MRZ8	115 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663		A8MUI8	341 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	GSTA4	O15217	222 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	FGF17	O60258	216 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	OR10H2	O60403	315 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	B4GALT2	O60909	372 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	COQ9	O75208	318 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	IFNA14	P01570	189 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	GGT1	P19440	569 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	STT3A	P46977	705 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	PRIM2	P49643	509 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	OR4D2	P58180	307 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	GAB1	Q13480	694 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	KPNB1	Q14974	876 aa	Known RBP	11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	CYP51A1	Q16850	503 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	VMAC	Q2NL98	169 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	GTDC1	Q4AE62	458 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	ACER2	Q5QJU3	275 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	PRAMEF8	Q5VWM4	474 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	PRAMEF7	Q5VXH5	474 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	GLYAT	Q6IB77	296 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	C6orf120	Q7Z4R8	191 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	IFNE	Q86WN2	208 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	EID3	Q8N140	333 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	OR2L13	Q8N349	312 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	BCORP1	Q8N888	145 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	NCLN	Q969V3	563 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	CTHRC1	Q96CG8	243 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	ART5	Q96L15	291 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	RNF145	Q96MT1	663 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	DGAT2	Q96PD7	388 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	TAAR6	Q96RI8	345 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	SLC6A13	Q9NSD5	602 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	RYDEN	Q9NUL5	291 aa	Known RBP	11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	FAF1	Q9UNN5	650 aa	Predicted RBP	11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	SLC5A6	Q9Y289	635 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	PCDHGB3	Q9Y5G1	929 aa		11.17	□□□□□ -0.62
CTNS-205	ENST00000467663	TCRBV16S1A1N1	A0A5B0	115 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	WASHC1	A8K0Z3	465 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	PRAMEF2	O60811	474 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	LDB3	O75112	727 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	TNFRSF21	O75509	655 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	PRKRA	O75569	313 aa	Known RBP	11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	PDE9A	O76083	593 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	F10	P00742	488 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	LDLR	P01130	860 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	GPI	P06744	558 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	TCN1	P20061	433 aa	Predicted RBP	11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	NT5E	P21589	574 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	PCGF2	P35227	344 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	CRAT	P43155	626 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	KHK	P50053	298 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	CDK9	P50750	372 aa	Known RBP	11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	MVD	P53602	400 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	SLC26A5	P58743	744 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	DSTN	P60981	165 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	PSPH	P78330	225 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	BTG2	P78543	158 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms