RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 MEPEQ9NQ76 525 aaPredicted RBP2.85□□□□□ -1.95
SMC4-207ENST00000467263 EXOSC3Q9NQT5 275 aaKnown RBP2.85□□□□□ -1.95
SMC4-207ENST00000467263 DCAF13Q9NV06 445 aaKnown RBP2.85□□□□□ -1.95
SMC4-207ENST00000467263 CYP39A1Q9NYL5 469 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 TRMT6Q9UJA5 497 aaKnown RBP2.85□□□□□ -1.95
SMC4-207ENST00000467263 TDRKHQ9Y2W6 561 aaKnown RBP2.85□□□□□ -1.95
SMC4-207ENST00000467263 DHRS7Q9Y394 339 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 FLVCR1Q9Y5Y0 555 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 ZMYM6O95789 1325 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 DHX29Q7Z478 1369 aaKnown RBP2.85□□□□□ -1.95
SMC4-207ENST00000467263 TRBV7-9A0A0J9YWB2 115 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 FAM231BA6NCW3 169 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 NPIPA2E9PIF3 369 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 BUB1O43683 1085 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 STAM2O75886 525 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 PGK2P07205 417 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 PSMB1P20618 241 aaKnown RBP2.84□□□□□ -1.95
SMC4-207ENST00000467263 HLCSP50747 726 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 DIO3P55073 304 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 SSTP61278 116 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 RAB35Q15286 201 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 AGKQ53H12 422 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 BEND6Q5SZJ8 279 aaPredicted RBP2.84□□□□□ -1.95
SMC4-207ENST00000467263 MEDAGQ5VYS4 303 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 ADAMTSL2Q86TH1 951 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 TGIF2LYQ8IUE0 185 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 C14orf178Q8N769 122 aaPredicted RBP2.84□□□□□ -1.95
SMC4-207ENST00000467263 CCDC51Q96ER9 411 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 EEF2KMTQ96G04 330 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 COQ7Q99807 217 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 C19orf24Q9BVV8 132 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 SIRPDQ9H106 197 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 ZNF702PQ9H963 129 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 MBD2Q9UBB5 411 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 FZR1Q9UM11 496 aa2.84□□□□□ -1.95
SMC4-207ENST00000467263 NOL7Q9UMY1 257 aaKnown RBP2.84□□□□□ -1.95
SMC4-207ENST00000467263 WI2-2373I1.2A0A1W2PRP0 233 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 LATO43561 262 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 SERF1AO75920 110 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 TOXO94900 526 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 PGK1P00558 417 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 H2AFZP0C0S5 128 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 COPB2P35606 906 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 STK19P49842 368 aaPredicted RBP2.83□□□□□ -1.96
SMC4-207ENST00000467263 ARF5P84085 180 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 CKAP4Q07065 602 aaKnown RBP2.83□□□□□ -1.96
SMC4-207ENST00000467263 CAMK4Q16566 473 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 DMKNQ6E0U4 476 aaPredicted RBP2.83□□□□□ -1.96
SMC4-207ENST00000467263 UFSP1Q6NVU6 142 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 ADGRD2Q7Z7M1 963 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 PARGQ86W56 976 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 C9orf40Q8IXQ3 194 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 DHTKD1Q96HY7 919 aaPredicted RBP2.83□□□□□ -1.96
SMC4-207ENST00000467263 NDUFAF3Q9BU61 184 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 CARD6Q9BX69 1037 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 ALDH8A1Q9H2A2 487 aaPredicted RBP2.83□□□□□ -1.96
SMC4-207ENST00000467263 HOMER3Q9NSC5 361 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 ELOVL2Q9NXB9 296 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 HMG20BQ9P0W2 317 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 RPS6KB2Q9UBS0 482 aa2.83□□□□□ -1.96
SMC4-207ENST00000467263 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 IGFBP1P08833 259 aaPredicted RBP2.82□□□□□ -1.96
SMC4-207ENST00000467263 ZCCHC18P0CG32 403 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 ZP3P21754 424 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 UGT1A3P35503 534 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 MAGEA4P43358 317 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 RPS6P62753 249 aaKnown RBP2.82□□□□□ -1.96
SMC4-207ENST00000467263 SRYQ05066 204 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 C2orf76Q3KRA6 126 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 SBK1Q52WX2 424 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 ZNF57Q68EA5 555 aaPredicted RBP2.82□□□□□ -1.96
SMC4-207ENST00000467263 ZNF530Q6P9A1 599 aaPredicted RBP2.82□□□□□ -1.96
SMC4-207ENST00000467263 HACD2Q6Y1H2 254 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 MOB1BQ7L9L4 216 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 SPC24Q8NBT2 197 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 EXOC6Q8TAG9 804 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 ADAMTS16Q8TE57 1224 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 CCDC43Q96MW1 224 aaKnown RBP2.82□□□□□ -1.96
SMC4-207ENST00000467263 NACA2Q9H009 215 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 ABCG8Q9H221 673 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 PDE10AQ9Y233 779 aa2.82□□□□□ -1.96
SMC4-207ENST00000467263 TRBV2A0A0J9YWF9 115 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 IMPA2O14732 288 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 KERAO60938 352 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 ZNF254O75437 659 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 PNPP00491 289 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 IGHV3-23P01764 117 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 RPA1P27694 616 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 RIPPLY3P57055 190 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 KYAT1Q16773 422 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 PARP6Q2NL67 630 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 ACSF3Q4G176 576 aaPredicted RBP2.81□□□□□ -1.96
SMC4-207ENST00000467263 SCARA5Q6ZMJ2 495 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 P4HA3Q7Z4N8 544 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 GOLGA7Q7Z5G4 137 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 CSNK1A1LQ8N752 337 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 CCNYQ8ND76 341 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 NEK11Q8NG66 645 aa2.81□□□□□ -1.96
SMC4-207ENST00000467263 WDR36Q8NI36 951 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms