RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 WDR53Q7Z5U6 358 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 SERPINA11Q86U17 422 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 HORMAD2Q8N7B1 307 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 COX18Q8N8Q8 333 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 OR5D16Q8NGK9 328 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 PNPT1Q8TCS8 783 aaKnown RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 ASB15Q8WXK1 588 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 CDS1Q92903 461 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 SPACA9Q96E40 222 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 OMA1Q96E52 524 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 SGCZQ96LD1 299 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 YIPF4Q9BSR8 244 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 C1orf21Q9H246 121 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 IKZF5Q9H5V7 419 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 KAT8Q9H7Z6 458 aaKnown RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 LIN28AQ9H9Z2 209 aaKnown RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 IL1RL2Q9HB29 575 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 LIPT1Q9Y234 373 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 DSPP15924 2871 aaKnown RBP14.01□□□□□ -0.17
NPHP4-205ENST00000466897 EML6Q6ZMW3 1958 aa14.01□□□□□ -0.17
NPHP4-205ENST00000466897 CACNA1GO43497 2377 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 A8MVJ9 347 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 ERVH48-1M5A8F1 160 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 TSPAN2O60636 221 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 HNRNPCL1O60812 293 aaKnown RBP14□□□□□ -0.17
NPHP4-205ENST00000466897 TNFRSF21O75509 655 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 PPM1BO75688 479 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 UBOX5O94941 541 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 KCNK2O95069 426 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 IL33O95760 270 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 CASRP41180 1078 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 SOX3P41225 446 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 CRATP43155 626 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 CYB561P49447 251 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 PNLIPRP2P54317 469 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 DSTNP60981 165 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 POU6F2P78424 691 aaPredicted RBP14□□□□□ -0.17
NPHP4-205ENST00000466897 GABPB1Q06547 395 aaPredicted RBP14□□□□□ -0.17
NPHP4-205ENST00000466897 PLCXD2Q0VAA5 305 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 KCNAB2Q13303 367 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 RAPSNQ13702 412 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 NNATQ16517 81 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 DECR1Q16698 335 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 ARHGAP11BQ3KRB8 267 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 TNFAIP8L2Q6P589 184 aaPredicted RBP14□□□□□ -0.17
NPHP4-205ENST00000466897 TMEM81Q6P7N7 255 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 C16orf47Q6ZP98 133 aaPredicted RBP14□□□□□ -0.17
NPHP4-205ENST00000466897 NET1Q7Z628 596 aaPredicted RBP14□□□□□ -0.17
NPHP4-205ENST00000466897 PGAM4Q8N0Y7 254 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 TMEM156Q8N614 296 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 METTL25Q8N6Q8 603 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 BCORP1Q8N888 145 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 GOLM1Q8NBJ4 401 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 FBXO30Q8TB52 745 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 OIT3Q8WWZ8 545 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 DIO2Q92813 273 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 WBP1Q96G27 269 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 SECISBP2Q96T21 854 aaKnown RBP14□□□□□ -0.17
NPHP4-205ENST00000466897 SLC39A3Q9BRY0 314 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 G6PC3Q9BUM1 346 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 TMEM38AQ9H6F2 299 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 POLE3Q9NRF9 147 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 ABCD2Q9UBJ2 740 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 P2RX2Q9UBL9 471 aa14□□□□□ -0.17
NPHP4-205ENST00000466897 ATMQ13315 3056 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 GXYLT2A0PJZ3 443 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 OR5H15A6NDH6 313 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 OR6B1O95007 311 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 WDPCPO95876 746 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 OR12D1P0DN82 309 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 SFTPCP11686 197 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 ETFAP13804 333 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 KRT20P35900 424 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 CPA2P48052 419 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 MTPNP58546 118 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 BNIP1Q12981 228 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 TUBA3CQ13748 450 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 EFR3AQ14156 821 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 GNA13Q14344 377 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 DCST2Q5T1A1 773 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 PRAMEF8Q5VWM4 474 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 PRAMEF7Q5VXH5 474 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 TUBA3EQ6PEY2 450 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 C16orf89Q6UX73 402 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 LINC00696Q6ZRV3 163 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 NUP54Q7Z3B4 507 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 OR4N2Q8NGD1 307 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 RNF138Q8WVD3 245 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 PIK3R3Q92569 461 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 PMM1Q92871 262 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 TMBIM1Q969X1 311 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 TMEM125Q96AQ2 219 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 RMND5BQ96G75 393 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-205ENST00000466897 ABHD17AQ96GS6 310 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 COL21A1Q96P44 957 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 TRNT1Q96Q11 434 aaKnown RBP13.99□□□□□ -0.17
NPHP4-205ENST00000466897 ARHGAP9Q9BRR9 750 aa13.99□□□□□ -0.17
NPHP4-205ENST00000466897 UTP23Q9BRU9 249 aaKnown RBP13.99□□□□□ -0.17
NPHP4-205ENST00000466897 THUMPD3Q9BV44 507 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms