RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 RIPK3Q9Y572 518 aa3.18□□□□□ -1.9
CCDC58-203ENST00000466854 ZNF541Q9H0D2 1346 aa3.18□□□□□ -1.9
CCDC58-203ENST00000466854 CACNA1AO00555 2505 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 IGLV9-49A0A0B4J1Y8 123 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TRAV25A0A0B4J276 109 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 A0A0J9YYE9 177 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 C1orf232A0A0U1RR37 186 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 C13orf42A0A1B0GVH6 325 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 FEZF1A0PJY2 475 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 HYKKA2RU49 373 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 SUPT3HB4E1H0 165 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TRIM77I1YAP6 450 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 HIP1O00291 1037 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 FOXE1O00358 373 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 SLC22A2O15244 555 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 CREG1O75629 220 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 CABYRO75952 493 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 MYO1DO94832 1006 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 IGLV1-44P01699 117 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TRBC1P01850 177 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 HLA-DRAP01903 254 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 EDN1P05305 212 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 HOXB8P17481 243 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 LBPP18428 481 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 NCF2P19878 526 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 ITGA3P26006 1051 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 PSMB4P28070 264 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 PRDX6P30041 224 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 NMT1P30419 496 aaKnown RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 ADRA1AP35348 466 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 CBX5P45973 191 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 SLC6A12P48065 614 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 FNTAP49354 379 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 GTF2A1P52655 376 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 MTTPP55157 894 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 YWHAEP62258 255 aaKnown RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 SNRPD1P62314 119 aaKnown RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 CDR2Q01850 454 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 LGALS3BPQ08380 585 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 NCBP1Q09161 790 aaKnown RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TMEM187Q14656 261 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 NONOQ15233 471 aaKnown RBP eCLIP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TAF13Q15543 124 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 KYAT1Q16773 422 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 PARP6Q2NL67 630 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 HKDC1Q2TB90 917 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 ZFP69Q49AA0 526 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TEX44Q53QW1 395 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 LDLRAP1Q5SW96 308 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 THEM4Q5T1C6 240 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 LRRC38Q5VT99 294 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TXNRD3NBQ6F5E7 133 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 FAM109BQ6ICB4 259 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TMEM53Q6P2H8 277 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 C11orf57Q6ZUT1 292 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TRMT11Q7Z4G4 463 aaKnown RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 CENPLQ8N0S6 344 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 ZNF843Q8N446 348 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 PPFIBP2Q8ND30 876 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TRPV3Q8NET8 790 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 OR4K14Q8NGD5 310 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 CD300LFQ8TDQ1 290 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 RNF128Q8TEB7 428 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TMEM190Q8WZ59 177 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 RAD54LQ92698 747 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 HAVCR1Q96D42 359 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 C4orf36Q96KX1 117 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 ALKBH7Q9BT30 221 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 PARD6GQ9BYG4 376 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 ANKRD60Q9BZ19 345 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 DNTTIP1Q9H147 329 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 BLZF1Q9H2G9 400 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 MTIF3Q9H2K0 278 aaKnown RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 MMP27Q9H306 513 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TMEM245Q9H330 911 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TBC1D17Q9HA65 648 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 MAGEF1Q9HAY2 307 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 NEK6Q9HC98 313 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 FARSBQ9NSD9 589 aaKnown RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 OSER1Q9NX31 292 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 SLCO1C1Q9NYB5 712 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 KLHL8Q9P2G9 620 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 RCOR3Q9P2K3 495 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 ERVK-18Q9QC07 812 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 PACSIN2Q9UNF0 486 aaPredicted RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 SNX7Q9UNH6 387 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 MGAT4BQ9UQ53 548 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 RNF24Q9Y225 148 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 PADI2Q9Y2J8 665 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 MKI67P46013 3256 aaKnown RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 TRPM7Q96QT4 1865 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 ABCC6O95255 1503 aa3.17□□□□□ -1.9
CCDC58-203ENST00000466854 RBBP6Q7Z6E9 1792 aaKnown RBP3.17□□□□□ -1.9
CCDC58-203ENST00000466854 COL2A1P02458 1487 aaPredicted RBP3.16□□□□□ -1.9
CCDC58-203ENST00000466854 SLIT3O75094 1523 aa3.16□□□□□ -1.9
CCDC58-203ENST00000466854 IQANK1A0A1B0GTG1 560 aa3.16□□□□□ -1.9
CCDC58-203ENST00000466854 LOC105371267A0A1B0GV96 52 aa3.16□□□□□ -1.9
CCDC58-203ENST00000466854 MACROD2A1Z1Q3 448 aa3.16□□□□□ -1.9
CCDC58-203ENST00000466854 C12orf71A8MTZ7 269 aa3.16□□□□□ -1.9
CCDC58-203ENST00000466854 TCP11X1B4DZS4 312 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms