RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, human

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDEM3-204	ENST00000466392	NAGA	P17050	411 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	GABRA3	P34903	492 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	KRT20	P35900	424 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	MAN2A2	P49641	1150 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	SLC18A1	P54219	525 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	CASP6	P55212	293 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	PER3	P56645	1201 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	SLC10A1	Q14973	349 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	TOMM20	Q15388	145 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	PGS1	Q32NB8	556 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	TBCEL	Q5QJ74	424 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	CPTP	Q5TA50	214 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	OR5M10	Q6IEU7	315 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	RGS9BP	Q6ZS82	235 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	R3HCC1L	Q7Z5L2	792 aa	Known RBP	10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	WDR75	Q8IWA0	830 aa	Known RBP	10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	CLECL1	Q8IZS7	167 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	CLEC4F	Q8N1N0	589 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	MARVELD2	Q8N4S9	558 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	OR5AK3P	Q8NH89	298 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	SLC9A6	Q92581	669 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	NTNG2	Q96CW9	530 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	FAM120B	Q96EK7	910 aa	Known RBP	10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	GIMAP5	Q96F15	307 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	SLC35A4	Q96G79	324 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	MARK4	Q96L34	752 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	SECISBP2	Q96T21	854 aa	Known RBP	10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	LMF2	Q9BU23	707 aa	Known RBP	10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	RTN4R	Q9BZR6	473 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	CXorf36	Q9H7Y0	433 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	MEAF6	Q9HAF1	191 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	THAP1	Q9NVV9	213 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	SUCO	Q9UBS9	1254 aa	Known RBP	10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	CBLC	Q9ULV8	474 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	C15orf41	Q9Y2V0	281 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	SLC6A5	Q9Y345	797 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	SNX8	Q9Y5X2	465 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	MED12	Q93074	2177 aa		10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	PHF3	Q92576	2039 aa	Known RBP	10.79	□□□□□ -0.68
EDEM3-204	ENST00000466392	ARHGAP21	Q5T5U3	1957 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	SLITRK5	O94991	958 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	SNX4	O95219	450 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	IGKV1D-16	P01601	117 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	GP1BB	P13224	206 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	TCEA1	P23193	301 aa	Known RBP	10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	EPHA3	P29320	983 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	PTPN6	P29350	595 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	CLDN8	P56748	225 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	RPP38	P78345	283 aa	Known RBP	10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	OCRL	Q01968	901 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	MAD2L1	Q13257	205 aa	Predicted RBP	10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	DUSP5	Q16690	384 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	GXYLT1	Q4G148	440 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	EIPR1	Q53HC9	387 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	ATG16L1	Q676U5	607 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	OR4F3	Q6IEY1	312 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	ZNF585A	Q6P3V2	769 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	MAMDC2	Q7Z304	686 aa	Predicted RBP	10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	HDX	Q7Z353	690 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	MAVS	Q7Z434	540 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	MRGPRG	Q86SM5	289 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	PACS2	Q86VP3	889 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	HOMEZ	Q8IX15	550 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	WDSUB1	Q8N9V3	476 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	SLC16A11	Q8NCK7	471 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	OR1J4	Q8NGS1	313 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	JADE3	Q92613	823 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	ZNF75CP	Q92670	426 aa	Predicted RBP	10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	COQ8B	Q96D53	544 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	RMND5B	Q96G75	393 aa	Predicted RBP	10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	TMEM41A	Q96HV5	264 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	TEX37	Q96LM6	180 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	SH3GL2	Q99962	352 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	DUSP26	Q9BV47	211 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	UBQLN3	Q9H347	655 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	SERHL	Q9NQF3	203 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	ACSS1	Q9NUB1	689 aa	Predicted RBP	10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	ZCCHC3	Q9NUD5	404 aa	Known RBP	10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	ASIC5	Q9NY37	505 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392	B4GALT7	Q9UBV7	327 aa		10.78	□□□□□ -0.68
EDEM3-204	ENST00000466392		A0A1B0GVC2	190 aa		10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	KDM4E	B2RXH2	506 aa	Predicted RBP	10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	AQP7	O14520	342 aa		10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	SNPH	O15079	494 aa		10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	ANKRD28	O15084	1053 aa		10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	CFLAR	O15519	480 aa		10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	EMC8	O43402	210 aa		10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	GMFG	O60234	142 aa		10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	SNUPN	O95149	360 aa	Known RBP	10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	HMGN2	P05204	90 aa	Known RBP	10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	LBP	P18428	481 aa		10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	PRPS1L1	P21108	318 aa		10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	GRN	P28799	593 aa	Known RBP	10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	SOAT1	P35610	550 aa		10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	RPL3	P39023	403 aa	Known RBP	10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	MAP3K8	P41279	467 aa		10.77	□□□□□ -0.69
EDEM3-204	ENST00000466392	PNLIPRP2	P54317	469 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms