RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ACSS1Q9NUB1 689 aaPredicted RBP17.39■□□□□ 0.37
CAPN3-209ENST00000466222 KIF17Q9P2E2 1029 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 TRPC4Q9UBN4 977 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 MAP4K5Q9Y4K4 846 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 SPACA6W5XKT8 324 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 FREM2Q5SZK8 3169 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 CELSR3Q9NYQ7 3312 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 A0A1B0GX78 115 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 CLDN25C9JDP6 229 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 DLL1O00548 723 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 DSCR3O14972 297 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 SULT1C4O75897 302 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 INMTO95050 263 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 OCM2P0CE71 109 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 OCMP0CE72 109 aaPredicted RBP17.39■□□□□ 0.37
CAPN3-209ENST00000466222 CSNK2A2P19784 350 aaPredicted RBP17.39■□□□□ 0.37
CAPN3-209ENST00000466222 PPP2R1BP30154 601 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 SERPINB10P48595 397 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 CEBPEQ15744 281 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 NPTX1Q15818 432 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 FAHD1Q6P587 224 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 DGAT2L6Q6ZPD8 337 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 PRSS58Q8IYP2 241 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 YIPF6Q96EC8 236 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 ZNF304Q9HCX3 659 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 KRT84Q9NSB2 600 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 ADPRHL2Q9NX46 363 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 PDP1Q9P0J1 537 aaPredicted RBP17.39■□□□□ 0.37
CAPN3-209ENST00000466222 SAMHD1Q9Y3Z3 626 aaKnown RBP17.39■□□□□ 0.37
CAPN3-209ENST00000466222 CLDN16Q9Y5I7 305 aa17.39■□□□□ 0.37
CAPN3-209ENST00000466222 E9PQ18 207 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 POLR1CO15160 346 aaPredicted RBP17.38■□□□□ 0.37
CAPN3-209ENST00000466222 GPR75O95800 540 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 MPIP34949 423 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 GPC1P35052 558 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 PCGF2P35227 344 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 KCNC4Q03721 635 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 PIGFQ07326 219 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 SLC13A2Q13183 592 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 TRA2AQ13595 282 aaKnown RBP eCLIP17.38■□□□□ 0.37
CAPN3-209ENST00000466222 MAD2L1BPQ15013 274 aaPredicted RBP17.38■□□□□ 0.37
CAPN3-209ENST00000466222 LCN10Q6JVE6 187 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 RHBDD2Q6NTF9 364 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 SZRD1Q7Z422 152 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 GALNT5Q7Z7M9 940 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 CENPSQ8N2Z9 138 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 IRF2BPLQ9H1B7 796 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 ZNF282Q9UDV7 671 aaPredicted RBP17.38■□□□□ 0.37
CAPN3-209ENST00000466222 PCDHGA10Q9Y5H3 936 aa17.38■□□□□ 0.37
CAPN3-209ENST00000466222 RIF1Q5UIP0 2472 aaKnown RBP17.37■□□□□ 0.37
CAPN3-209ENST00000466222 SPAARA0A1B0GVQ0 90 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 RGS10O43665 173 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 ETFAP13804 333 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 CPMP14384 443 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 CHI3L1P36222 383 aaPredicted RBP17.37■□□□□ 0.37
CAPN3-209ENST00000466222 ETV5P41161 510 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 MC3RP41968 323 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 PRKAG1P54619 331 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 SKP1P63208 163 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 VLDLRP98155 873 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 ELOAQ14241 798 aaKnown RBP17.37■□□□□ 0.37
CAPN3-209ENST00000466222 MLC1Q15049 377 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 DGUOKQ16854 277 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 SHISA6Q6ZSJ9 500 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 PRSS48Q7RTY5 328 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 LAPTM4BQ86VI4 370 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 RNF130Q86XS8 419 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 LRRC25Q8N386 305 aaPredicted RBP17.37■□□□□ 0.37
CAPN3-209ENST00000466222 MAL2Q969L2 176 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 CLIP3Q96DZ5 547 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 OTUB1Q96FW1 271 aaPredicted RBP17.37■□□□□ 0.37
CAPN3-209ENST00000466222 SH3YL1Q96HL8 342 aaPredicted RBP17.37■□□□□ 0.37
CAPN3-209ENST00000466222 CHST8Q9H2A9 424 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 EPS8L2Q9H6S3 715 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 CHCHD3Q9NX63 227 aaKnown RBP17.37■□□□□ 0.37
CAPN3-209ENST00000466222 ERVK-18Q9QC07 812 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 CTSFQ9UBX1 484 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 RAPGEFL1Q9UHV5 662 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 A0A1W2PNU3 283 aaPredicted RBP17.37■□□□□ 0.37
CAPN3-209ENST00000466222 hCG_2039718K7EN88 272 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 XPNPEP2O43895 674 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 FHP07954 510 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 CRATP43155 626 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 CCT3P49368 545 aaKnown RBP17.37■□□□□ 0.37
CAPN3-209ENST00000466222 ST13P50502 369 aaKnown RBP17.37■□□□□ 0.37
CAPN3-209ENST00000466222 DSG2Q14126 1118 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 RGNQ15493 299 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 ISXQ2M1V0 245 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 SPDYE7PQ495Y7 208 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 ARHGAP40Q5TG30 622 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 NIPAL1Q6NVV3 410 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 COX15Q7KZN9 410 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 MARCH9Q86YJ5 346 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 MINDY2Q8NBR6 621 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 FCGR1BQ92637 280 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 MVB12AQ96EY5 273 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 GABARAPL3Q9BY60 117 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 LANCL2Q9NS86 450 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 GIMAP4Q9NUV9 329 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 THUMPD1Q9NXG2 353 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms