RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 LRRC74AQ0VAA2 488 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 DUSP5Q16690 384 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 BICRALQ6AI39 1079 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 CDC73Q6P1J9 531 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 MSANTD1Q6ZTZ1 278 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 OR4A15Q8NGL6 344 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 OR5AK3PQ8NH89 298 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 ZNF317Q96PQ6 595 aaPredicted RBP18.64■□□□□ 0.57
SKA3-205ENST00000465471 OR52E6Q96RD3 313 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 STACQ99469 402 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 TTTY12Q9BZ98 90 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 ZNF385DQ9H6B1 395 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 SERHLQ9NQF3 203 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 DUSP22Q9NRW4 184 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 TMEM45AQ9NWC5 275 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 TUBA8Q9NY65 449 aaPredicted RBP18.64■□□□□ 0.57
SKA3-205ENST00000465471 VPS4AQ9UN37 437 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 POLEQ07864 2286 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 GXYLT2A0PJZ3 443 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 FAM234BA2RU67 622 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 LRRC3CA6NJW4 275 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 REM1O75628 298 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 WISP1O95388 367 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 IL33O95760 270 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 GABRA3P34903 492 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 RFC3P40938 356 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 STX1BP61266 288 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 SNTA1Q13424 505 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 TP53BP2Q13625 1128 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 EFR3AQ14156 821 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 LASP1Q14847 261 aaKnown RBP18.63■□□□□ 0.57
SKA3-205ENST00000465471 DECR1Q16698 335 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 SPDYE7PQ495Y7 208 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 BHLHB9Q6PI77 547 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 BNC2Q6ZN30 1099 aaPredicted RBP18.63■□□□□ 0.57
SKA3-205ENST00000465471 FUNDC1Q8IVP5 155 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 FBXO30Q8TB52 745 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 FAM110BQ8TC76 370 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 PIK3R3Q92569 461 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 EFHD2Q96C19 240 aaPredicted RBP18.63■□□□□ 0.57
SKA3-205ENST00000465471 GPR137Q96N19 417 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 RILPQ96NA2 401 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 ADOQ96SZ5 270 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 ACTRT3Q9BYD9 372 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 IL1RL2Q9HB29 575 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 PCDHGB4Q9UN71 923 aa18.63■□□□□ 0.57
SKA3-205ENST00000465471 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.63■□□□□ 0.57
SKA3-205ENST00000465471 NINQ8N4C6 2090 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 A0A0G2JND7 137 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 RNF103-CHMP3A0A140T963 221 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 ADAM10O14672 748 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 SNX4O95219 450 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 IGKV1D-16P01601 117 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 VIMP08670 466 aaKnown RBP18.62■□□□□ 0.57
SKA3-205ENST00000465471 TROVE2P10155 538 aaKnown RBP eCLIP18.62■□□□□ 0.57
SKA3-205ENST00000465471 UQCRC2P22695 453 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 IL12BP29460 328 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 SOAT1P35610 550 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 KRT20P35900 424 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 UQCRFS1P47985 274 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 POLR2JP52435 117 aaKnown RBP18.62■□□□□ 0.57
SKA3-205ENST00000465471 KCNJ2P63252 427 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 MRPS22P82650 360 aaKnown RBP18.62■□□□□ 0.57
SKA3-205ENST00000465471 MRPL49Q13405 166 aaKnown RBP18.62■□□□□ 0.57
SKA3-205ENST00000465471 RCAN2Q14206 197 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 FNDC7Q5VTL7 733 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 MIPOL1Q8TD10 442 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 GPR151Q8TDV0 419 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 SLC9A6Q92581 669 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 TMCO6Q96DC7 493 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 TMEM41AQ96HV5 264 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 DOHHQ9BU89 302 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 TMEM120AQ9BXJ8 343 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 PIGUQ9H490 435 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 SERHL2Q9H4I8 314 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 ZDHHC11Q9H8X9 412 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 SLC52A3Q9NQ40 469 aa18.62■□□□□ 0.57
SKA3-205ENST00000465471 FLNCQ14315 2725 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 ZGRF1Q86YA3 2104 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 NCKAP5O14513 1909 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 ANKUB1A6NFN9 424 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 PRAMEF25A6NGN4 478 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 KCNH1O95259 989 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 CPSF4O95639 269 aaKnown RBP18.61■□□□□ 0.57
SKA3-205ENST00000465471 KRT16P08779 473 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 ALOX5P09917 674 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 CYP4B1P13584 511 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 GNLYP22749 145 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 CDKN2CP42773 168 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 SQLEQ14534 574 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.61■□□□□ 0.57
SKA3-205ENST00000465471 TIGD2Q4W5G0 525 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 KRTCAP3Q53RY4 240 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 CMPK2Q5EBM0 449 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 SAXO2Q658L1 398 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 SLC30A6Q6NXT4 461 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 BLOC1S3Q6QNY0 202 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 C6orf120Q7Z4R8 191 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 CLEC4FQ8N1N0 589 aa18.61■□□□□ 0.57
SKA3-205ENST00000465471 NEURL3Q96EH8 262 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms