RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 DECR1Q16698 335 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 KRTCAP3Q53RY4 240 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 MFSD12Q6NUT3 480 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 PAOXQ6QHF9 649 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 SLC16A11Q8NCK7 471 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 OR5AK3PQ8NH89 298 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 EFHD2Q96C19 240 aaPredicted RBP13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 TMCO6Q96DC7 493 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 SLC35A4Q96G79 324 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 RILPQ96NA2 401 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 CCDC115Q96NT0 180 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 NODALQ96S42 347 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 YIPF4Q9BSR8 244 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 DOHHQ9BU89 302 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 ANGPTL4Q9BY76 406 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 TSPAN10Q9H1Z9 355 aaPredicted RBP13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 METTL7AQ9H8H3 244 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 IL1RL2Q9HB29 575 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 GPATCH2Q9NW75 528 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 TUBA8Q9NY65 449 aaPredicted RBP13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 MRTO4Q9UKD2 239 aaKnown RBP13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 NPIPA1Q9UND3 350 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 FAF1Q9UNN5 650 aaPredicted RBP13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 GXYLT2A0PJZ3 443 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 TFECO14948 347 aaPredicted RBP13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 WISP2O76076 250 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 GLSO94925 669 aaPredicted RBP13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 SOX30O94993 753 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 SNX4O95219 450 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 KCNH1O95259 989 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 ALOX5P09917 674 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 TROVE2P10155 538 aaKnown RBP eCLIP13.31□□□□□ -0.285e-7■□□□□ 10.5
SQSTM1-205ENST00000464493 ACP2P11117 423 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 UQCRC2P22695 453 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 GNLYP22749 145 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 PSMD4P55036 377 aaKnown RBP13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 PPIAP62937 165 aaKnown RBP13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 IRX1P78414 480 aaPredicted RBP13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 LRRC74AQ0VAA2 488 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 FOXO1Q12778 655 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 MRPL49Q13405 166 aaKnown RBP13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 SNTA1Q13424 505 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 ELOAQ14241 798 aaKnown RBP13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 DUSP5Q16690 384 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 EXOSC6Q5RKV6 272 aaKnown RBP13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 BICRALQ6AI39 1079 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 CDC73Q6P1J9 531 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 TMEM81Q6P7N7 255 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 C6orf120Q7Z4R8 191 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 SLC22A16Q86VW1 577 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 SIAH3Q8IW03 269 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 CLEC4FQ8N1N0 589 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 OR9I1Q8NGQ6 314 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 GOT1L1Q8NHS2 421 aaPredicted RBP13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 FBXO30Q8TB52 745 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 PIK3R3Q92569 461 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 JADE3Q92613 823 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 CHMP6Q96FZ7 201 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 ACTRT3Q9BYD9 372 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 TTTY12Q9BZ98 90 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 GIN1Q9NXP7 522 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 SEC14L3Q9UDX4 400 aa13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 BOKQ9UMX3 212 aaPredicted RBP13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 UBR5O95071 2799 aaPredicted RBP13.31□□□□□ -0.28
SQSTM1-205ENST00000464493 ESPL1Q14674 2120 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 ZGRF1Q86YA3 2104 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 RNF103-CHMP3A0A140T963 221 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 FAM234BA2RU67 622 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 ACOT7O00154 380 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 ASNA1O43681 348 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 HS6ST1O60243 411 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 TRIM3O75382 744 aaPredicted RBP13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 IL33O95760 270 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 KRT16P08779 473 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 NCF2P19878 526 aaPredicted RBP13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 ZFP36L2P47974 494 aaKnown RBP13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 UQCRFS1P47985 274 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 RFX3P48380 749 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 ATP4BP51164 291 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 KCNC4Q03721 635 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 HYAL4Q2M3T9 481 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 SLC30A6Q6NXT4 461 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 GFRALQ6UXV0 394 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 BNC2Q6ZN30 1099 aaPredicted RBP13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 PACS2Q86VP3 889 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 OR52N2Q8NGI0 321 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 ADAMTS15Q8TE58 950 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 OTUB1Q96FW1 271 aaPredicted RBP13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 RMND5BQ96G75 393 aaPredicted RBP13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 JSRP1Q96MG2 331 aaPredicted RBP13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 GPR137Q96N19 417 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 PANX1Q96RD7 426 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 STACQ99469 402 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 PIGUQ9H490 435 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 ZFP64Q9NPA5 681 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 DUSP22Q9NRW4 184 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 KLRF1Q9NZS2 232 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 TRIM33Q9UPN9 1127 aa13.3□□□□□ -0.28
SQSTM1-205ENST00000464493 PRAMEF25A6NGN4 478 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 CCDC154A6NI56 674 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms