RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	C7orf26	Q96N11	449 aa		8.82	□□□□□ -1
PSMD4-208	ENST00000462970	MS4A4E	Q96PG1	132 aa		8.82	□□□□□ -1
PSMD4-208	ENST00000462970	OR52B2	Q96RD2	323 aa		8.82	□□□□□ -1
PSMD4-208	ENST00000462970	NODAL	Q96S42	347 aa		8.82	□□□□□ -1
PSMD4-208	ENST00000462970	OSBPL11	Q9BXB4	747 aa		8.82	□□□□□ -1
PSMD4-208	ENST00000462970	BHLHE41	Q9C0J9	482 aa	Predicted RBP	8.82	□□□□□ -1
PSMD4-208	ENST00000462970	GALNT9	Q9HCQ5	603 aa		8.82	□□□□□ -1
PSMD4-208	ENST00000462970	AIG1	Q9NVV5	245 aa		8.82	□□□□□ -1
PSMD4-208	ENST00000462970	B4GALT7	Q9UBV7	327 aa		8.82	□□□□□ -1
PSMD4-208	ENST00000462970	CBLC	Q9ULV8	474 aa		8.82	□□□□□ -1
PSMD4-208	ENST00000462970	MAPRE3	Q9UPY8	281 aa		8.82	□□□□□ -1
PSMD4-208	ENST00000462970	FLNB	O75369	2602 aa	Known RBP	8.82	□□□□□ -1
PSMD4-208	ENST00000462970	CCL21	O00585	134 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	T	O15178	435 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	UBD	O15205	165 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	POLR3G	O15318	223 aa	Predicted RBP	8.81	□□□□□ -1
PSMD4-208	ENST00000462970	SLC19A2	O60779	497 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	CELA3A	P09093	270 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	RFPL3S	P0C7P2	107 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	ACP2	P11117	423 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	CYP4B1	P13584	511 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	TCEA1	P23193	301 aa	Known RBP	8.81	□□□□□ -1
PSMD4-208	ENST00000462970	CASP3	P42574	277 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	FRK	P42685	505 aa	Predicted RBP	8.81	□□□□□ -1
PSMD4-208	ENST00000462970	PRIM2	P49643	509 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	DGKQ	P52824	942 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	AQP5	P55064	265 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	MRPS22	P82650	360 aa	Known RBP	8.81	□□□□□ -1
PSMD4-208	ENST00000462970	PSG6	Q00889	435 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	STX5	Q13190	355 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	GAB1	Q13480	694 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	EFR3A	Q14156	821 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	LASP1	Q14847	261 aa	Known RBP	8.81	□□□□□ -1
PSMD4-208	ENST00000462970	C3AR1	Q16581	482 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	VPS26B	Q4G0F5	336 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	CYP27C1	Q4G0S4	372 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	SPANXN4	Q5MJ08	99 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	TBCEL	Q5QJ74	424 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	OGFOD2	Q6N063	350 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	PAOX	Q6QHF9	649 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	C3P1	Q6ZMU1	363 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	RGS9BP	Q6ZS82	235 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	CLEC4F	Q8N1N0	589 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	FAM109A	Q8N4B1	249 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	NATD1	Q8N6N6	113 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	COX18	Q8N8Q8	333 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	CDRT4	Q8N9R6	151 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	VPS37A	Q8NEZ2	397 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	OR56A1	Q8NGH5	318 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	CKAP2	Q8WWK9	683 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	HGD	Q93099	445 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	FAM120B	Q96EK7	910 aa	Known RBP	8.81	□□□□□ -1
PSMD4-208	ENST00000462970	MAGEB18	Q96M61	343 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	ANGPTL4	Q9BY76	406 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	CXorf36	Q9H7Y0	433 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	PROK2	Q9HC23	129 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	SH2D2A	Q9NP31	389 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	ZFP64	Q9NPA5	681 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	SIRT3	Q9NTG7	399 aa	Predicted RBP	8.81	□□□□□ -1
PSMD4-208	ENST00000462970	TINAG	Q9UJW2	476 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	MRTO4	Q9UKD2	239 aa	Known RBP	8.81	□□□□□ -1
PSMD4-208	ENST00000462970	FAF1	Q9UNN5	650 aa	Predicted RBP	8.81	□□□□□ -1
PSMD4-208	ENST00000462970	SLC5A6	Q9Y289	635 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	LIPG	Q9Y5X9	500 aa		8.81	□□□□□ -1
PSMD4-208	ENST00000462970	MED12	Q93074	2177 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	USP9Y	O00507	2555 aa	Predicted RBP	8.8	□□□□□ -1
PSMD4-208	ENST00000462970	RNF103-CHMP3	A0A140T963	221 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	OR6C70	A6NIJ9	312 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	LRRC3C	A6NJW4	275 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970		E9PBE3	544 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	NPIPA2	E9PIF3	369 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	NPIPA3	F8WFD2	350 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	PRRG2	O14669	202 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	GMFG	O60234	142 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	TSPAN2	O60636	221 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	ICOSLG	O75144	302 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	GLS	O94925	669 aa	Predicted RBP	8.8	□□□□□ -1
PSMD4-208	ENST00000462970	SNX4	O95219	450 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	KCNH1	O95259	989 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	UTS2	O95399	124 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	PSMG1	O95456	288 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	HMGN2	P05204	90 aa	Known RBP	8.8	□□□□□ -1
PSMD4-208	ENST00000462970	ESRRA	P11474	423 aa	Predicted RBP	8.8	□□□□□ -1
PSMD4-208	ENST00000462970	IDO1	P14902	403 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	PTGS2	P35354	604 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	CHI3L1	P36222	383 aa	Predicted RBP	8.8	□□□□□ -1
PSMD4-208	ENST00000462970	MAN2A2	P49641	1150 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	CASP9	P55211	416 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	PER3	P56645	1201 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	STX1B	P61266	288 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	RPS26	P62854	115 aa	Known RBP	8.8	□□□□□ -1
PSMD4-208	ENST00000462970	HBA1	P69905	142 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	PSPH	P78330	225 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	FOXO1	Q12778	655 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	SF3A3	Q12874	501 aa	Known RBP eCLIP	8.8	□□□□□ -1	1e-7	■■■■□ 19.8
PSMD4-208	ENST00000462970	SLC10A1	Q14973	349 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	DUSP5	Q16690	384 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	C4orf17	Q53FE4	359 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	ANXA8L1	Q5VT79	327 aa		8.8	□□□□□ -1
PSMD4-208	ENST00000462970	OR5M10	Q6IEU7	315 aa		8.8	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms