RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 PEPDP12955 493 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 PSMB1P20618 241 aaKnown RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 TLX1P31314 330 aaPredicted RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 PIK3CBP42338 1070 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 KCNJ5P48544 419 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 CASP9P55211 416 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 FRG1Q14331 258 aaKnown RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 PON3Q15166 354 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 OR4D1Q15615 310 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 NNATQ16517 81 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 CYP1B1Q16678 543 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 PRICKLE4Q2TBC4 344 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 UBAP2Q5T6F2 1119 aaKnown RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 HLA-DQA1Q5Y7H0 255 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 OR52E8Q6IFG1 317 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 SULT1C3Q6IMI6 304 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 GRHL2Q6ISB3 625 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 MED27Q6P2C8 311 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 FRA10AC1Q70Z53 315 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 ATG4DQ86TL0 474 aaPredicted RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 ARIH2OSQ8N7S6 290 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 GBP7Q8N8V2 638 aaPredicted RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 RNF214Q8ND24 703 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 OR6K3Q8NGY3 331 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 HUS1BQ8NHY5 278 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 SMAP2Q8WU79 429 aaPredicted RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 RGMAQ96B86 450 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 LCORQ96JN0 433 aaPredicted RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 PINK1Q9BXM7 581 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 BEX2Q9BXY8 128 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 TRIM2Q9C040 744 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 ACTR6Q9GZN1 396 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 ADAM19Q9H013 955 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 CNOT10Q9H9A5 744 aaKnown RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 POPDC3Q9HBV1 291 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 LYARQ9NX58 379 aaKnown RBP6.89□□□□□ -1.31
SMC3-202ENST00000462899 MAT2BQ9NZL9 334 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 EHD3Q9NZN3 535 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 FRRS1LQ9P0K9 344 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 CTNNAL1Q9UBT7 734 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 RNF115Q9Y4L5 304 aa6.89□□□□□ -1.31
SMC3-202ENST00000462899 HEATR1Q9H583 2144 aaKnown RBP6.88□□□□□ -1.31
SMC3-202ENST00000462899 FAM95CA0A1B0GW59 222 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 EFCAB8A8MWE9 144 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 NDUFB5O43674 189 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 TSPAN2O60636 221 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 GCM2O75603 506 aaPredicted RBP6.88□□□□□ -1.31
SMC3-202ENST00000462899 ATP1B1P05026 303 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 FAM58BPP0C7Q3 252 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 ZNF16P17020 682 aaPredicted RBP6.88□□□□□ -1.31
SMC3-202ENST00000462899 GRK2P25098 689 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 DPP4P27487 766 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 CFPP27918 469 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 EMDP50402 254 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 DSCR4P56555 118 aaPredicted RBP6.88□□□□□ -1.31
SMC3-202ENST00000462899 CLDN20P56880 219 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 IRF8Q02556 426 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 PLCXD2Q0VAA5 305 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 MAP4K2Q12851 820 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 HIST2H2ACQ16777 129 aaPredicted RBP6.88□□□□□ -1.31
SMC3-202ENST00000462899 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMC3-202ENST00000462899 TMEM44Q2T9K0 475 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 HIST2H2AA3Q6FI13 130 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 C11orf71Q6IPW1 123 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 LRRC70Q7Z2Q7 622 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 GGNQ86UU5 652 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 WFDC8Q8IUA0 241 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 PPIL6Q8IXY8 311 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 TXLNBQ8N3L3 684 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 SNX31Q8N9S9 440 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 KBTBD8Q8NFY9 601 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 UBTD2Q8WUN7 234 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 UBE2E3Q969T4 207 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 ADGRG7Q96K78 797 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 BTBD9Q96Q07 612 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 HBEGFQ99075 208 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 BAG1Q99933 345 aaPredicted RBP6.88□□□□□ -1.31
SMC3-202ENST00000462899 NAT9Q9BTE0 207 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 LRRC1Q9BTT6 524 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 TRIM5Q9C035 493 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 SHARPINQ9H0F6 387 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 BARX1Q9HBU1 254 aaPredicted RBP6.88□□□□□ -1.31
SMC3-202ENST00000462899 ZBTB26Q9HCK0 441 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 ASIC3Q9UHC3 531 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 CES1P1Q9UKY3 287 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 GPR52Q9Y2T5 361 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 ZNF337Q9Y3M9 751 aa6.88□□□□□ -1.31
SMC3-202ENST00000462899 GOLGA8QA0A0J9YX86 632 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 GOLGA8OA6NCC3 632 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 GOLGA8NF8WBI6 632 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 GOLGA8RI6L899 631 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 CTAGE8P0CG41 777 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 CT45A8P0DMV1 189 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 CT45A9P0DMV2 189 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 PCNAP12004 261 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 CPMP14384 443 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 CD1DP15813 335 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 SRD5A1P18405 259 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 KRT15P19012 456 aa6.87□□□□□ -1.31
SMC3-202ENST00000462899 DRD5P21918 477 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms