RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SLC22A9Q8IVM8 553 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 SLC44A2Q8IWA5 706 aaPredicted RBP13.95□□□□□ -0.18
SKA3-204ENST00000462482 C17orf53Q8N3J3 647 aaPredicted RBP13.95□□□□□ -0.18
SKA3-204ENST00000462482 CNEP1R1Q8N9A8 125 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 WFDC11Q8NEX6 87 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 UHMK1Q8TAS1 419 aaKnown RBP13.95□□□□□ -0.18
SKA3-204ENST00000462482 DCAKDQ8WVC6 231 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 C18orf12Q96KH6 178 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 VSTM2LQ96N03 204 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 FAM111AQ96PZ2 611 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 ZNF382Q96SR6 550 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 SLC39A3Q9BRY0 314 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 PTGES2Q9H7Z7 377 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 FOLH1BQ9HBA9 442 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 SLC35C2Q9NQQ7 365 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 DLL4Q9NR61 685 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 ZNF226Q9NYT6 803 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 HEY2Q9UBP5 337 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 FBXL2Q9UKC9 423 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 MRTO4Q9UKD2 239 aaKnown RBP13.95□□□□□ -0.18
SKA3-204ENST00000462482 UQCRHLA0A096LP55 91 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 A0A1W2PNV4 684 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 FAM171A2A8MVW0 826 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 PLOD3O60568 738 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 TSPAN2O60636 221 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 SLITRK5O94991 958 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 ENO1P06733 434 aaKnown RBP13.94□□□□□ -0.18
SKA3-204ENST00000462482 CT45A8P0DMV1 189 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 CT45A9P0DMV2 189 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 ZNF708P17019 499 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 CLDN18P56856 261 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 FGFBP1Q14512 234 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 ZNHIT3Q15649 155 aaPredicted RBP13.94□□□□□ -0.18
SKA3-204ENST00000462482 CT45A2Q5DJT8 189 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 SPDYAQ5MJ70 313 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 TCHHL1Q5QJ38 904 aaPredicted RBP13.94□□□□□ -0.18
SKA3-204ENST00000462482 SH2D4BQ5SQS7 431 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 ZNF678Q5SXM1 525 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 UBAP2Q5T6F2 1119 aaKnown RBP13.94□□□□□ -0.18
SKA3-204ENST00000462482 RAET1LQ5VY80 246 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 P3H2Q8IVL5 708 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 UBQLNLQ8IYU4 475 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 MNS1Q8NEH6 495 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 CDC26Q8NHZ8 85 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 C16orf78Q8WTQ4 265 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 EFHD2Q96C19 240 aaPredicted RBP13.94□□□□□ -0.18
SKA3-204ENST00000462482 ANKRA2Q9H9E1 313 aa13.94□□□□□ -0.18
SKA3-204ENST00000462482 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
SKA3-204ENST00000462482 LINC01387J3KSC0 135 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 HCRTR2O43614 444 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 SCO2O43819 266 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 ANXA4P09525 319 aaPredicted RBP13.93□□□□□ -0.18
SKA3-204ENST00000462482 HK1P19367 917 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 CD53P19397 219 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 IMPDH1P20839 514 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 ATP5F1P24539 256 aaPredicted RBP13.93□□□□□ -0.18
SKA3-204ENST00000462482 TIA1P31483 386 aaKnown RBP eCLIP13.93□□□□□ -0.18
SKA3-204ENST00000462482 KCNJ5P48544 419 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 PSMD4P55036 377 aaKnown RBP13.93□□□□□ -0.18
SKA3-204ENST00000462482 PKNOX1P55347 436 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 BTKQ06187 659 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 LCP2Q13094 533 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 DECR1Q16698 335 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 UNC50Q53HI1 259 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 CNPY4Q8N129 248 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 PIGTQ969N2 578 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 MED18Q9BUE0 208 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 G6PC3Q9BUM1 346 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 ACPTQ9BZG2 426 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 DSN1Q9H410 356 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 ZNF395Q9H8N7 513 aaPredicted RBP13.93□□□□□ -0.18
SKA3-204ENST00000462482 MIEF1Q9NQG6 463 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 STOML1Q9UBI4 398 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 ZNF225Q9UK10 706 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 PRRC2AP48634 2157 aaKnown RBP13.93□□□□□ -0.18
SKA3-204ENST00000462482 ZFHX3Q15911 3703 aa13.93□□□□□ -0.18
SKA3-204ENST00000462482 ZIC3O60481 467 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 SMPD2O60906 423 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 TGM6O95932 706 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 INHBBP09529 407 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 SBK3P0C264 359 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 CHN1P15882 459 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 FPR1P21462 350 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 NTSP30990 170 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 HOXC12P31275 282 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 EVI2BP34910 448 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 CD79BP40259 229 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 PCYT1AP49585 367 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 NCBP2P52298 156 aaKnown RBP eCLIP13.92□□□□□ -0.18
SKA3-204ENST00000462482 RPS3AP61247 264 aaKnown RBP13.92□□□□□ -0.18
SKA3-204ENST00000462482 LTBQ06643 244 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 C2orf80Q0P641 193 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 GANABQ14697 944 aaKnown RBP13.92□□□□□ -0.18
SKA3-204ENST00000462482 IMPG1Q17R60 797 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 CYP27C1Q4G0S4 372 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 PLXDC2Q6UX71 529 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 NPSR1Q6W5P4 371 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 MMGT1Q8N4V1 131 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 OR7G2Q8NG99 324 aa13.92□□□□□ -0.18
SKA3-204ENST00000462482 PGM2Q96G03 612 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms