RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 RB1P06400 928 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 TRHRP34981 398 aaPredicted RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 TAS2R41P59536 307 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SREBF2Q12772 1141 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 MRPL28Q13084 256 aaKnown RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 NOGQ13253 232 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 NDUFA9Q16795 377 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SDE2Q6IQ49 451 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 ANKRD54Q6NXT1 300 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 CREB3L2Q70SY1 520 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 VRK2Q86Y07 508 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SIRT6Q8N6T7 355 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 DTD2Q96FN9 168 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 SECISBP2Q96T21 854 aaKnown RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 TBX5Q99593 518 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 NARFLQ9H6Q4 476 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 POLMQ9NP87 494 aaPredicted RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 ISYNA1Q9NPH2 558 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 AHSPQ9NZD4 102 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 ZFR2Q9UPR6 939 aaKnown RBP11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 LIPT1Q9Y234 373 aa11.02□□□□□ -0.65
PDZRN3-203ENST00000462146 NOTCH4Q99466 2003 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 TSPAN11A1L157 253 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 CCL16O15467 120 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 MYCP01106 439 aaPredicted RBP11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 EIF4EP06730 217 aaKnown RBP11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 C8orf89P0DMQ9 161 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 TBXA2RP21731 343 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 MAPK9P45984 424 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 RNASE12Q5GAN4 147 aaKnown RBP11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 LCTLQ6UWM7 567 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 NKAIN4Q8IVV8 208 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 FAM20CQ8IXL6 584 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 POGLUT1Q8NBL1 392 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 UBE2E3Q969T4 207 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 AICDAQ9GZX7 198 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 DDX31Q9H8H2 851 aaKnown RBP11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 TM7SF3Q9NS93 570 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 MOSPD1Q9UJG1 213 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 HCFC2Q9Y5Z7 792 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 CHP2O43745 196 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 LCMT2O60294 686 aaKnown RBP11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 LRG1P02750 347 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 BTCP35070 178 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 NNMTP40261 264 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 NCBP2P52298 156 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 TOR2AQ5JU69 321 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 METAP1DQ6UB28 335 aaPredicted RBP11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 ZNF767PQ75MW2 155 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 C17orf64Q86WR6 236 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 DNAJA4Q8WW22 397 aaPredicted RBP11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 HSD17B8Q92506 261 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 IRF7Q92985 503 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 AMDHD1Q96NU7 426 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 SMAD5Q99717 465 aaKnown RBP11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 C17orf62Q9BQA9 187 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 DPH7Q9BTV6 452 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 ATP13A2Q9NQ11 1180 aa11.01□□□□□ -0.65
PDZRN3-203ENST00000462146 MDC1Q14676 2089 aaKnown RBP11□□□□□ -0.65
PDZRN3-203ENST00000462146 NDUFS4O43181 175 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 ERAL1O75616 437 aaKnown RBP11□□□□□ -0.65
PDZRN3-203ENST00000462146 HLA-DPB1P04440 258 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 HMGN2P05204 90 aaKnown RBP11□□□□□ -0.65
PDZRN3-203ENST00000462146 ENPP1P22413 925 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 PPP2R1BP30154 601 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 PKLRP30613 574 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 GPR1P46091 355 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 OR10A3P58181 314 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 ADAM15Q13444 863 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 WDR45BQ5MNZ6 344 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 AADACL4Q5VUY2 407 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 ZNF793Q6ZN11 406 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 MRGPREQ86SM8 312 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 OR11H7Q8NGC8 314 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 OR11H4Q8NGC9 324 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 COQ10AQ96MF6 247 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 ZNF558Q96NG5 402 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 SLC38A2Q96QD8 506 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11□□□□□ -0.65
PDZRN3-203ENST00000462146 EQTNQ9NQ60 294 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 IMP3Q9NV31 184 aaKnown RBP11□□□□□ -0.65
PDZRN3-203ENST00000462146 SAGE1Q9NXZ1 904 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 CHST2Q9Y4C5 530 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 WNT6Q9Y6F9 365 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 C4orf51C9J302 202 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 SURF4O15260 269 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 SLC6A1P30531 599 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 OMPP47874 163 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 STXBP1P61764 594 aaKnown RBP11□□□□□ -0.65
PDZRN3-203ENST00000462146 HTRA3P83110 453 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 RIN1Q13671 783 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 NDUFAF5Q5TEU4 345 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 NUDT13Q86X67 352 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 GHDCQ8N2G8 530 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 KLHL36Q8N4N3 616 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 OR51G2Q8NGK0 314 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 SETD7Q8WTS6 366 aaKnown RBP11□□□□□ -0.65
PDZRN3-203ENST00000462146 SMG7Q92540 1137 aaKnown RBP11□□□□□ -0.65
PDZRN3-203ENST00000462146 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
PDZRN3-203ENST00000462146 FCRL4Q96PJ5 515 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms