RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 SYCE1Q8N0S2 351 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 GPD1LQ8N335 351 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 SLC43A2Q8N370 569 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 BANPQ8N9N5 519 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 LPCAT1Q8NF37 534 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 OR9A1PQ8NGU1 263 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 OR2AJ1Q8NGZ0 328 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 CDC26Q8NHZ8 85 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 IRGQQ8WZA9 623 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 EXT2Q93063 718 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 PIWIL1Q96J94 861 aaKnown RBP3.51□□□□□ -1.85
UBA3-204ENST00000461522 TMEM175Q9BSA9 504 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 NAA11Q9BSU3 229 aaPredicted RBP3.51□□□□□ -1.85
UBA3-204ENST00000461522 NUSAP1Q9BXS6 441 aaKnown RBP3.51□□□□□ -1.85
UBA3-204ENST00000461522 WWTR1Q9GZV5 400 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 DPAGT1Q9H3H5 408 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 RPF1Q9H9Y2 349 aaKnown RBP3.51□□□□□ -1.85
UBA3-204ENST00000461522 SPACA1Q9HBV2 294 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 NUDT15Q9NV35 164 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 ARHGEF38Q9NXL2 777 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 EPHA6Q9UF33 1036 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 GINS2Q9Y248 185 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 COQ4Q9Y3A0 265 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 PDE4DIPQ5VU43 2346 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 CEP290O15078 2479 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 ZSWIM8A7E2V4 1837 aa3.51□□□□□ -1.85
UBA3-204ENST00000461522 UMODL1Q5DID0 1318 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 SMIM28A0A1B0GU29 152 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 HEATR9A2RTY3 570 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 C5orf51A6NDU8 294 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 ARL5CA6NH57 179 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 EPM2AB3EWF7 344 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 ANKRD63C9JTQ0 380 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 K7ERQ8 282 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 RASGRF2O14827 1237 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 HDAC3O15379 428 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 TEX28O15482 410 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 B4GALT5O43286 388 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 TRAPPC3O43617 180 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 N4BP1O75113 896 aaKnown RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 MTX2O75431 263 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 CIB2O75838 187 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 AKAP3O75969 853 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 WDPCPO95876 746 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 OTCP00480 354 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 ZNF18P17022 549 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 PTPN3P26045 913 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 CASP1P29466 404 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 VAMP7P51809 220 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 STX1BP61266 288 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 OTUD4Q01804 1114 aaKnown RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 MYL5Q02045 173 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 CYP24A1Q07973 514 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 SMARCB1Q12824 385 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 ELAVL2Q12926 359 aaKnown RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 IL24Q13007 206 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 AIMP2Q13155 320 aaKnown RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 RAPSNQ13702 412 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 NR1D2Q14995 579 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 RPS6KA1Q15418 735 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 SHHQ15465 462 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 SNRNP35Q16560 246 aaKnown RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 ANKRD20A4Q4UJ75 823 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 TAF1BQ53T94 588 aaPredicted RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 ANKRD20A8PQ5CZ79 823 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 ANKRD20A2Q5SQ80 823 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 WLSQ5T9L3 541 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 RIPPLY2Q5TAB7 128 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 ANKRD20A1Q5TYW2 823 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 ANKRD20A3Q5VUR7 823 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 ZNF343Q6P1L6 599 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 AFTPHQ6ULP2 937 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 NCCRP1Q6ZVX7 275 aaPredicted RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 PTAR1Q7Z6K3 402 aaPredicted RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 DEFB128Q7Z7B8 93 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 VPS36Q86VN1 386 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 TDHQ8IZJ6 230 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 CSGALNACT2Q8N6G5 542 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 LRRC52Q8N7C0 313 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 EIF1ADQ8N9N8 165 aaKnown RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 SMYD1Q8NB12 490 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 OR6S1Q8NH40 331 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 PHLDA1Q8WV24 401 aaPredicted RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 NELFBQ8WX92 580 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 GTF3AQ92664 365 aaKnown RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 SLCO2A1Q92959 643 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 SLC22A18Q96BI1 424 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 TPD52L3Q96J77 140 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 RPGRIP1Q96KN7 1286 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 CASD1Q96PB1 797 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 ABHD1Q96SE0 405 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 CBWD1Q9BRT8 395 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 LMF2Q9BU23 707 aaKnown RBP3.5□□□□□ -1.85
UBA3-204ENST00000461522 LRRC61Q9BV99 259 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 PINK1Q9BXM7 581 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 FAM129AQ9BZQ8 928 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 S1PR5Q9H228 398 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 KCNK15Q9H427 330 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 LRRC19Q9H756 370 aa3.5□□□□□ -1.85
UBA3-204ENST00000461522 UCK1Q9HA47 277 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms