RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 PNLIPRP2P54317 469 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 RPL38P63173 70 aaKnown RBP17.24■□□□□ 0.35
COL5A1-203ENST00000460264 UGT3A2Q3SY77 523 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 RFTN2Q52LD8 501 aaPredicted RBP17.24■□□□□ 0.35
COL5A1-203ENST00000460264 ANKRD26P1Q6NSI1 321 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 ZCCHC23Q6ZST2 131 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 YRDCQ86U90 279 aaKnown RBP17.24■□□□□ 0.35
COL5A1-203ENST00000460264 LIX1LQ8IVB5 337 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 DDIASQ8IXT1 998 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 PM20D2Q8IYS1 436 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 MREGQ8N565 214 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 TWIST2Q8WVJ9 160 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 GFM2Q969S9 779 aaKnown RBP17.24■□□□□ 0.35
COL5A1-203ENST00000460264 EFHD2Q96C19 240 aaPredicted RBP17.24■□□□□ 0.35
COL5A1-203ENST00000460264 ELP4Q96EB1 424 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 C14orf79Q96F83 325 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 LURAP1Q96LR2 239 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 TMEM109Q9BVC6 243 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 TRAF6Q9Y4K3 522 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 WIF1Q9Y5W5 379 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 DOCK7Q96N67 2140 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 KDM4EB2RXH2 506 aaPredicted RBP17.23■□□□□ 0.35
COL5A1-203ENST00000460264 PDPK1O15530 556 aa17.23■□□□□ 0.35
COL5A1-203ENST00000460264 CBR3O75828 277 aa17.23■□□□□ 0.35
COL5A1-203ENST00000460264 IFI6P09912 130 aa17.23■□□□□ 0.35
COL5A1-203ENST00000460264 ZNF385BQ569K4 471 aa17.23■□□□□ 0.35
COL5A1-203ENST00000460264 ZNF551Q7Z340 670 aaPredicted RBP17.23■□□□□ 0.35
COL5A1-203ENST00000460264 HOMEZQ8IX15 550 aa17.23■□□□□ 0.35
COL5A1-203ENST00000460264 ABTB1Q969K4 478 aaPredicted RBP17.23■□□□□ 0.35
COL5A1-203ENST00000460264 TSSK3Q96PN8 268 aa17.23■□□□□ 0.35
COL5A1-203ENST00000460264 OR2B2Q9GZK3 357 aa17.23■□□□□ 0.35
COL5A1-203ENST00000460264 EML4Q9HC35 981 aaKnown RBP17.23■□□□□ 0.35
COL5A1-203ENST00000460264 CAMK2AQ9UQM7 478 aa17.23■□□□□ 0.35
COL5A1-203ENST00000460264 TMED5Q9Y3A6 229 aa17.23■□□□□ 0.35
COL5A1-203ENST00000460264 ANKRD17O75179 2603 aaKnown RBP17.22■□□□□ 0.35
COL5A1-203ENST00000460264 ENO4A6NNW6 628 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 PIP5K1BO14986 540 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 AKAP10O43572 662 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 TYROBPO43914 113 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 TBX19O60806 448 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 EPPINO95925 133 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 ACTL6AO96019 429 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 CYP4B1P13584 511 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 ARRB2P32121 409 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 GAS1P54826 345 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 WNT3P56703 355 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 MRPS22P82650 360 aaKnown RBP17.22■□□□□ 0.35
COL5A1-203ENST00000460264 HSPB3Q12988 150 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 PDE7AQ13946 482 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 SLC25A35Q3KQZ1 300 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 GALNTL6Q49A17 601 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 CYP27C1Q4G0S4 372 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 SH2D4BQ5SQS7 431 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 WDR53Q7Z5U6 358 aaPredicted RBP17.22■□□□□ 0.35
COL5A1-203ENST00000460264 PLCZ1Q86YW0 608 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 LACC1Q8IV20 430 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 DMRTC2Q8IXT2 367 aaPredicted RBP17.22■□□□□ 0.35
COL5A1-203ENST00000460264 CLYBLQ8N0X4 340 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 CLHC1Q8NHS4 586 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 AGR3Q8TD06 166 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 CIDECQ96AQ7 238 aaPredicted RBP17.22■□□□□ 0.35
COL5A1-203ENST00000460264 PPCDCQ96CD2 204 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 WDYHV1Q96HA8 205 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 REEP4Q9H6H4 257 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 FBXL2Q9UKC9 423 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 CSMD2Q7Z408 3487 aa17.22■□□□□ 0.35
COL5A1-203ENST00000460264 HSPB2A8KAH6 182 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 B4DXG7 233 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 GRK2P25098 689 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 CEACAM8P31997 349 aaPredicted RBP17.21■□□□□ 0.35
COL5A1-203ENST00000460264 SERPINB5P36952 375 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 ETV4P43268 484 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 HSPB2Q16082 182 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 XKR7Q5GH72 579 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 NSUN5P2Q63ZY6 315 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 NAXEQ8NCW5 288 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 TNIP2Q8NFZ5 429 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 OR14L1PQ8NHC6 308 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 LMF2Q9BU23 707 aaKnown RBP17.21■□□□□ 0.35
COL5A1-203ENST00000460264 Q9N2J8 555 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 BAIAP2L1Q9UHR4 511 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 CBLCQ9ULV8 474 aa17.21■□□□□ 0.35
COL5A1-203ENST00000460264 BPGMP07738 259 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 BCKDHAP12694 445 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 SRD5A2P31213 254 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 EVI2BP34910 448 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 GCKP35557 465 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 TIMP3P35625 211 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 FRKP42685 505 aaPredicted RBP17.2■□□□□ 0.34
COL5A1-203ENST00000460264 ASMTP46597 345 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 KRTAP10-9P60411 292 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 TLE4Q04727 773 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 ZNF844Q08AG5 666 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 SF3B4Q15427 424 aaKnown RBP eCLIP17.2■□□□□ 0.34
COL5A1-203ENST00000460264 ZNHIT3Q15649 155 aaPredicted RBP17.2■□□□□ 0.34
COL5A1-203ENST00000460264 KRT71Q3SY84 523 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 OR5M10Q6IEU7 315 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 IFNEQ86WN2 208 aa17.2■□□□□ 0.34
COL5A1-203ENST00000460264 RELL2Q8NC24 303 aaPredicted RBP17.2■□□□□ 0.34
COL5A1-203ENST00000460264 OR6Y1Q8NGX8 325 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms