RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 CCDC153Q494R4 210 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 IKBIPQ70UQ0 350 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 TRIM46Q7Z4K8 759 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 ADGRE4PQ86SQ3 457 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 SLC44A2Q8IWA5 706 aaPredicted RBP20.69■□□□□ 0.9
PTPN4-207ENST00000460162 GSPT2Q8IYD1 628 aaKnown RBP20.69■□□□□ 0.9
PTPN4-207ENST00000460162 CDC26Q8NHZ8 85 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.69■□□□□ 0.9
PTPN4-207ENST00000460162 RDH11Q8TC12 318 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 RMND5BQ96G75 393 aaPredicted RBP20.69■□□□□ 0.9
PTPN4-207ENST00000460162 UCN2Q96RP3 112 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 TM9SF2Q99805 663 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 SFXN3Q9BWM7 321 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 PPCSQ9HAB8 311 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 TAS2R7Q9NYW3 318 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 JKAMPQ9P055 326 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 DKKL1Q9UK85 242 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 FBXL2Q9UKC9 423 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 CBLCQ9ULV8 474 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 MRPS18CQ9Y3D5 142 aaKnown RBP20.69■□□□□ 0.9
PTPN4-207ENST00000460162 OR10H1Q9Y4A9 318 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 A0A1W2PPM1 405 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 NME6O75414 186 aaPredicted RBP20.68■□□□□ 0.9
PTPN4-207ENST00000460162 CRCPO75575 148 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 GRK2P25098 689 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 NTSP30990 170 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 MC3RP41968 323 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 SLCO1A2P46721 670 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 NCBP2P52298 156 aaKnown RBP eCLIP20.68■□□□□ 0.9
PTPN4-207ENST00000460162 DGKQP52824 942 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 IST1P53990 364 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 DNAJB13P59910 316 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 PSG6Q00889 435 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 C2orf80Q0P641 193 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 FAM71E1Q6IPT2 247 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 SH2D5Q6ZV89 423 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 TRIM42Q8IWZ5 723 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 EIF1ADQ8N9N8 165 aaKnown RBP20.68■□□□□ 0.9
PTPN4-207ENST00000460162 EFHD2Q96C19 240 aaPredicted RBP20.68■□□□□ 0.9
PTPN4-207ENST00000460162 SFXN2Q96NB2 322 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 ACBD3Q9H3P7 528 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 AKAP6Q13023 2319 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 ITPR3Q14573 2671 aa20.68■□□□□ 0.9
PTPN4-207ENST00000460162 TUBAL3A6NHL2 446 aa20.67■□□□□ 0.9
PTPN4-207ENST00000460162 JUNP05412 331 aaKnown RBP20.67■□□□□ 0.9
PTPN4-207ENST00000460162 CHMP24386 653 aa20.67■□□□□ 0.9
PTPN4-207ENST00000460162 GAS1P54826 345 aa20.67■□□□□ 0.9
PTPN4-207ENST00000460162 CFAP157Q5JU67 520 aa20.67■□□□□ 0.9
PTPN4-207ENST00000460162 WNT2BQ93097 391 aa20.67■□□□□ 0.9
PTPN4-207ENST00000460162 METTL2AQ96IZ6 378 aaKnown RBP20.67■□□□□ 0.9
PTPN4-207ENST00000460162 FOXC2Q99958 501 aa20.67■□□□□ 0.9
PTPN4-207ENST00000460162 RRAGDQ9NQL2 400 aaPredicted RBP20.67■□□□□ 0.9
PTPN4-207ENST00000460162 CLCF1Q9UBD9 225 aa20.67■□□□□ 0.9
PTPN4-207ENST00000460162 ST6GALNAC2Q9UJ37 374 aa20.67■□□□□ 0.9
PTPN4-207ENST00000460162 POLR3HQ9Y535 204 aaPredicted RBP20.67■□□□□ 0.9
PTPN4-207ENST00000460162 MTORP42345 2549 aa20.67■□□□□ 0.9
PTPN4-207ENST00000460162 CLCA1A8K7I4 914 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 PLOD2O00469 737 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 PLIN3O60664 434 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 RCBTB2O95199 551 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 GOSR1O95249 250 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 PSMG1O95456 288 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 IFI6P09912 130 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 ZNF708P17019 499 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 EVI2BP34910 448 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 CCT5P48643 541 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 LHX2P50458 406 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 SRYQ05066 204 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 DAZAP2Q15038 168 aaPredicted RBP20.66■□□□□ 0.9
PTPN4-207ENST00000460162 CYP27C1Q4G0S4 372 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 TMEM107Q6UX40 140 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 TDRPQ86YL5 185 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 OR2L13Q8N349 312 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 OR4N2Q8NGD1 307 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 G6PC3Q9BUM1 346 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 CXXC4Q9H2H0 198 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 DDX18Q9NVP1 670 aaKnown RBP20.66■□□□□ 0.9
PTPN4-207ENST00000460162 EDARQ9UNE0 448 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 ABCG2Q9UNQ0 655 aa20.66■□□□□ 0.9
PTPN4-207ENST00000460162 C19orf53Q9UNZ5 99 aaPredicted RBP20.66■□□□□ 0.9
PTPN4-207ENST00000460162 MED12LQ86YW9 2145 aa20.65■□□□□ 0.9
PTPN4-207ENST00000460162 UROSP10746 265 aa20.65■□□□□ 0.9
PTPN4-207ENST00000460162 PRPH2P23942 346 aa20.65■□□□□ 0.9
PTPN4-207ENST00000460162 DPP4P27487 766 aa20.65■□□□□ 0.9
PTPN4-207ENST00000460162 CRHR1P34998 444 aa20.65■□□□□ 0.9
PTPN4-207ENST00000460162 AGFG1P52594 562 aaKnown RBP20.65■□□□□ 0.9
PTPN4-207ENST00000460162 CLDN18P56856 261 aa20.65■□□□□ 0.9
PTPN4-207ENST00000460162 PRSS53Q2L4Q9 553 aa20.65■□□□□ 0.9
PTPN4-207ENST00000460162 OR5M10Q6IEU7 315 aa20.65■□□□□ 0.9
PTPN4-207ENST00000460162 OR4K17Q8NGC6 315 aa20.65■□□□□ 0.9
PTPN4-207ENST00000460162 GOT1L1Q8NHS2 421 aaPredicted RBP20.65■□□□□ 0.9
PTPN4-207ENST00000460162 OXSMQ9NWU1 459 aa20.65■□□□□ 0.9
PTPN4-207ENST00000460162 PPP4R1LQ9P1A2 415 aa20.65■□□□□ 0.9
PTPN4-207ENST00000460162 B4DXG7 233 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 NPIPB8E9PQR5 432 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 HCRTR2O43614 444 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 SHBGP04278 402 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 EPXP11678 715 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 DSCR4P56555 118 aaPredicted RBP20.64■□□□□ 0.89
PTPN4-207ENST00000460162 FOXF2Q12947 444 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms