RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 DKK3Q9UBP4 350 aa18.38■□□□□ 0.53
CNEP1R1-203ENST00000458059 ERVH48-1M5A8F1 160 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 SCO2O43819 266 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 ADH5P11766 374 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 AHRP35869 848 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 NOGQ13253 232 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 BTBD16Q32M84 506 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 DPEP2Q9H4A9 486 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 NFKBIL1Q9UBC1 381 aaPredicted RBP18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 GABRPO00591 440 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 LGI1O95970 557 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 PRNPP04156 253 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 ATXN8OSP0DMR3 200 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 NTSP30990 170 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 KRT33BQ14525 404 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 ZNF628Q5EBL2 1059 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 C3orf38Q5JPI3 329 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 SLAIN1Q8ND83 568 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 CXorf40AQ8TE69 158 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 TMEM255BQ8WV15 326 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 RASSF5Q8WWW0 418 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 SLC38A2Q96QD8 506 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 TRIM45Q9H8W5 580 aaPredicted RBP18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 MYO15AQ9UKN7 3530 aa18.37■□□□□ 0.53
CNEP1R1-203ENST00000458059 IGKV1-8A0A0C4DH67 115 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 A0A0G2JMP0 313 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 A0A0X1KG70 313 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 A0A1W2PR48 441 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 LYRM1O43325 122 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 SLC35G4P0C7Q5 338 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 CSNK1G2P78368 415 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 OR4N5Q8IXE1 308 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 OR4M2Q8NGB6 313 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 SNAPC3Q92966 411 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 SYNPO2LQ9H987 977 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 ZFR2Q9UPR6 939 aaKnown RBP18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 HSPB11Q9Y547 144 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 A0A1W2PPV9 198 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 EVI2BP34910 448 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 TAS2R38P59533 333 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 BNC1Q01954 994 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 MDC1Q14676 2089 aaKnown RBP18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 LRRTM4Q86VH4 590 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 SHISA5Q8N114 240 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 OR5K2Q8NHB8 316 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 AP3S1Q92572 193 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 RSPRY1Q96DX4 576 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 ATF6BQ99941 703 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 PTGFRNQ9P2B2 879 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 KIAA1549LQ6ZVL6 1849 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 A0A1W2PPK0 400 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 MRPL3P09001 348 aaKnown RBP18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 IL12RB1P42701 662 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 RPS5P46782 204 aaKnown RBP18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 RAB40BQ12829 278 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 KLHL12Q53G59 568 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 PPP2R2DQ66LE6 453 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 MTFR2Q6P444 385 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 TIGD4Q8IY51 512 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 DNAJC5GQ8N7S2 189 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 ZNF296Q8WUU4 475 aaPredicted RBP18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 OR8D1Q8WZ84 308 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 ARHGAP9Q9BRR9 750 aa18.36■□□□□ 0.53
CNEP1R1-203ENST00000458059 MEN1O00255 615 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 LANCL1O43813 399 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 ALAS2P22557 587 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 GABRA5P31644 462 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 KHKP50053 298 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 SNRPNP63162 240 aaKnown RBP18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 COX10Q12887 443 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 C6orf132Q5T0Z8 1188 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 CCNJQ5T5M9 372 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 PLEKHM3Q6ZWE6 761 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 CPOQ8IVL8 374 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 C12orf76Q8N812 135 aaPredicted RBP18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 PHF21AQ96BD5 680 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 MCOLN1Q9GZU1 580 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 TMEM245Q9H330 911 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 EPHX3Q9H6B9 360 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 CAPN10Q9HC96 672 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 EYSQ5T1H1 3165 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 TRAV6A0A075B6T7 132 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 PAHP00439 452 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 ACADMP11310 421 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 BCL6P41182 706 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 RGS8P57771 180 aaPredicted RBP18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 TPBGQ13641 420 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 C16orf62Q7Z3J2 963 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 SIRT6Q8N6T7 355 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 BBS10Q8TAM1 723 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 SAMD8Q96LT4 415 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 RHBGQ9H310 441 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 EXTL2Q9UBQ6 330 aa18.35■□□□□ 0.53
CNEP1R1-203ENST00000458059 LRIT2A6NDA9 550 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 REM1O75628 298 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 CISD3P0C7P0 127 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 CHRNB1P11230 501 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 SOX9P48436 509 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 YIF1BQ5BJH7 314 aa18.34■□□□□ 0.53
CNEP1R1-203ENST00000458059 PLBD1Q6P4A8 553 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms