RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 A4GALTQ9NPC4 353 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 DMRT3Q9NQL9 472 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 PTTG3PQ9NZH4 202 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SCP2D1Q9UJQ7 156 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SPATA2Q9UM82 520 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 TCRBV16S1A1N1A0A5B0 115 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 OR6C75A6NL08 312 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 NPC1O15118 1278 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 CASC3O15234 703 aaKnown RBP9.69□□□□□ -0.86
CLIP4-208ENST00000456385 SLCO2B1O94956 709 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 SLC2A10O95528 541 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 EPPINO95925 133 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 SRPRAP08240 638 aaKnown RBP9.69□□□□□ -0.86
CLIP4-208ENST00000456385 H2AFB2P0C5Z0 115 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 RPL17P18621 184 aaKnown RBP9.69□□□□□ -0.86
CLIP4-208ENST00000456385 TBXA2RP21731 343 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 RBMS1P29558 406 aaKnown RBP9.69□□□□□ -0.86
CLIP4-208ENST00000456385 SERPINA4P29622 427 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 PDHA2P29803 388 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 HLA-FP30511 346 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 MAP2K5Q13163 448 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 NHLRC3Q5JS37 347 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 LDLRAD1Q5T700 205 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 HBMQ6B0K9 141 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 SLC30A6Q6NXT4 461 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 CD300LDQ6UXZ3 194 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 ESPNLQ6ZVH7 1005 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 TAS1R1Q7RTX1 841 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 C6orf120Q7Z4R8 191 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 KLHL36Q8N4N3 616 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 POGLUT1Q8NBL1 392 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 OR10Z1Q8NGY1 313 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 TEX47Q8TBZ9 253 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 ACOT12Q8WYK0 555 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 NEURL3Q96EH8 262 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 SFXN2Q96NB2 322 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 KCNK12Q9HB15 430 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 MYNNQ9NPC7 610 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 FLVCR2Q9UPI3 526 aa9.69□□□□□ -0.86
CLIP4-208ENST00000456385 A0A0B4J203 849 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 A0A1B0GVI7 797 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SLC22A23A1A5C7 686 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 KDM4EB2RXH2 506 aaPredicted RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TMEM189-UBE2V1I3L0A0 370 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 RNF13O43567 381 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SLC28A2O43868 658 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 EFCAB14O75071 495 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SOCS5O75159 536 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 PROS1P07225 676 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ACP5P13686 325 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 DRD2P14416 443 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 NPR2P20594 1047 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 HOXD10P28358 340 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 LCN1P31025 176 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ATP6V1E1P36543 226 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 MANFP55145 182 aaKnown RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SMIM11AP58511 58 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TSPAN5P62079 268 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 GRM7Q14831 915 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 GPR68Q15743 365 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 FAM110CQ1W6H9 321 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SLC25A35Q3KQZ1 300 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ENTPD8Q5MY95 495 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 MORN1Q5T089 497 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 KIAA1211LQ6NV74 962 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 WASH2PQ6VEQ5 465 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 PRICKLE2Q7Z3G6 844 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SZRD1Q7Z422 152 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 RASGRP3Q8IV61 690 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 DCAF4L2Q8NA75 395 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TRPV1Q8NER1 839 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 OR56A3Q8NH54 315 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TRMT10AQ8TBZ6 339 aaKnown RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ZFPM2Q8WW38 1151 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ADAMTS14Q8WXS8 1223 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ST8SIA2Q92186 375 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 YIPF5Q969M3 257 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SGTBQ96EQ0 304 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TMEM169Q96HH4 297 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 LYSMD1Q96S90 227 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 PTPN18Q99952 460 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SARGQ9BW04 601 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF436Q9C0F3 470 aaPredicted RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SPRTNQ9H040 489 aaPredicted RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 SERHL2Q9H4I8 314 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TDP1Q9NUW8 608 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TNFRSF10DQ9UBN6 386 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 CBLCQ9ULV8 474 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 CHST2Q9Y4C5 530 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 RNF215Q9Y6U7 377 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF106Q9H2Y7 1883 aaKnown RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 A0A087WUU8 490 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 RTCAO00442 366 aaKnown RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF593O00488 134 aaPredicted RBP9.68□□□□□ -0.86
CLIP4-208ENST00000456385 TSPAN6O43657 245 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 NDUFA2O43678 99 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 FZD7O75084 574 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 UBXN7O94888 489 aa9.68□□□□□ -0.86
CLIP4-208ENST00000456385 WNT1P04628 370 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms