RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 PIPP12273 146 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 NUMBP49757 651 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SULT1A2P50226 295 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 LSM3P62310 102 aaKnown RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 IQCJQ1A5X6 159 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 DPY19L4Q7Z388 723 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 LRRTM4Q86VH4 590 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 IQCF1Q8N6M8 205 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 GPR150Q8NGU9 434 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PRAP1Q96NZ9 151 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 UHRF2Q96PU4 802 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SLC17A5Q9NRA2 495 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 KLF15Q9UIH9 416 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 BTNL2Q9UIR0 455 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SPTBN4Q9H254 2564 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 C1orf226A1L170 272 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 TVP23AA6NH52 213 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PRSS44E7EML9 344 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ANGPTL7O43827 346 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 HCKP08631 526 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 GGT1P19440 569 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 CNR1P21554 472 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 RFX3P48380 749 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 C1orf87Q8N0U7 546 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 GPR148Q8TDV2 347 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ZBTB8AQ96BR9 441 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 GSX2Q9BZM3 304 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SPON1Q9HCB6 807 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SLC17A7Q9P2U7 560 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 DEC1Q9P2X7 70 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ADAM29Q9UKF5 820 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PRR36Q9H6K5 1346 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 F5H5P2 479 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 LGALS2P05162 132 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SMIM6P0DI80 62 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 DPEP1P16444 411 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 FLYWCH1Q4VC44 716 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MISPQ8IVT2 679 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PHTF2Q8N3S3 785 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SLC5A11Q8WWX8 675 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 COL26A1Q96A83 441 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 RBMXL1Q96E39 390 aaKnown RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PCYT2Q99447 389 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SEMA6CQ9H3T2 930 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MUTYHQ9UIF7 546 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 DNMT3AQ9Y6K1 912 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 RNF215Q9Y6U7 377 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 E9PI62 339 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ARNTLO00327 626 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PLXNA2O75051 1894 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 GBAP04062 536 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PFKMP08237 780 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ITGA5P08648 1049 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MPC1LP0DKB6 136 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ALDH3B1P43353 468 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 NCBP2P52298 156 aaKnown RBP eCLIP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 TGFBIQ15582 683 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SSX1Q16384 188 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MSS51Q4VC12 460 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PRAMEF14Q5SWL7 426 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PPP1R13LQ8WUF5 828 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 DHRS1Q96LJ7 313 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SERINC2Q96SA4 455 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 FBXL3Q9UKT7 428 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PPM1HQ9ULR3 514 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SETD2Q9BYW2 2564 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 IQCMA0A1B0GVH7 501 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SLC22A23A1A5C7 686 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SCAMP3O14828 347 aaKnown RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 TSPAN6O43657 245 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 FADS1O60427 444 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 CD34P28906 385 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ERVK-16P61578 105 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MXD1Q05195 221 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ASAH1Q13510 395 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 CNN3Q15417 329 aaKnown RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ANKRD54Q6NXT1 300 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SUMF2Q8NBJ7 301 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MCCC2Q9HCC0 563 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ENTPD2Q9Y5L3 495 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MTORP42345 2549 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 XKRY2A2RUG3 117 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 C4orf47A7E2U8 309 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 TGM5O43548 720 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 CHRM1P11229 460 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 GNSP15586 552 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 TCTAP57738 103 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 FXNQ16595 210 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 UGT8Q16880 541 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 GGTA1PQ4G0N0 100 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ANKRD16Q6P6B7 361 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SLC35D2Q76EJ3 337 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SSX9Q7RTT3 188 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 DCAF4L2Q8NA75 395 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 RHOXF1Q8NHV9 184 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 CERKQ8TCT0 537 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 CANT1Q8WVQ1 401 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SAMD11Q96NU1 681 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MS4A4EQ96PG1 132 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 GPR21Q99679 349 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms