RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RNF224P0DH78 156 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 IDO1P14902 403 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 IL12AP29459 219 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 CA7P43166 264 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 MAGEA5P43359 124 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 ZFP36L2P47974 494 aaKnown RBP12.97□□□□□ -0.33
HDAC4-205ENST00000454542 GAS1P54826 345 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 HSF1Q00613 529 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 PLGLB1Q02325 96 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 RBPJQ06330 500 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 GAB1Q13480 694 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 UBAP2LQ14157 1087 aaKnown RBP12.97□□□□□ -0.33
HDAC4-205ENST00000454542 ZNHIT3Q15649 155 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-205ENST00000454542 LSM12Q3MHD2 195 aaKnown RBP12.97□□□□□ -0.33
HDAC4-205ENST00000454542 SPANXN4Q5MJ08 99 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 SLC30A6Q6NXT4 461 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 WDR53Q7Z5U6 358 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-205ENST00000454542 CLECL1Q8IZS7 167 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 OR56A1Q8NGH5 318 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 PRR7Q8TB68 274 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 RELTQ969Z4 430 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 MAGED4Q96JG8 741 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 C3orf14Q9HBI5 128 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 EQTNQ9NQ60 294 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 SDR39U1Q9NRG7 319 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-205ENST00000454542 ZCCHC3Q9NUD5 404 aaKnown RBP12.97□□□□□ -0.33
HDAC4-205ENST00000454542 GPATCH2Q9NW75 528 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 FAM120CQ9NX05 1096 aaKnown RBP12.97□□□□□ -0.33
HDAC4-205ENST00000454542 GIN1Q9NXP7 522 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 CBLCQ9ULV8 474 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 ABCG2Q9UNQ0 655 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 OSGIN2Q9Y236 505 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 SLC5A6Q9Y289 635 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 C15orf41Q9Y2V0 281 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 HRH3Q9Y5N1 445 aa12.97□□□□□ -0.33
HDAC4-205ENST00000454542 DOPEY1Q5JWR5 2465 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 LDLRP01130 860 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 IGKV1D-16P01601 117 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 RFPL3SP0C7P2 107 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 CYP4B1P13584 511 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 ELAVL4P26378 380 aaKnown RBP12.96□□□□□ -0.33
HDAC4-205ENST00000454542 IL12BP29460 328 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 PRIM2P49643 509 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 UFM1P61960 85 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 MRPS22P82650 360 aaKnown RBP12.96□□□□□ -0.33
HDAC4-205ENST00000454542 DUSP5Q16690 384 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 GSTA3Q16772 222 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 VPS26BQ4G0F5 336 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 TMEM198Q66K66 360 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 CDC73Q6P1J9 531 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 TRILQ7L0X0 811 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 SPPL2CQ8IUH8 684 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 GLB1L3Q8NCI6 653 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-205ENST00000454542 SLC16A11Q8NCK7 471 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 FAM110BQ8TC76 370 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 EFHD2Q96C19 240 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-205ENST00000454542 TMCO6Q96DC7 493 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 CCDC115Q96NT0 180 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 ADOQ96SZ5 270 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 STACQ99469 402 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 METTL7AQ9H8H3 244 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 DUSP22Q9NRW4 184 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 ZIM2Q9NZV7 527 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 OR10H1Q9Y4A9 318 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 WIF1Q9Y5W5 379 aa12.96□□□□□ -0.33
HDAC4-205ENST00000454542 PRSS51A0A1B0GVH4 220 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 GXYLT2A0PJZ3 443 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 B4DXG7 233 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 ATP8B1O43520 1251 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 HCN1O60741 890 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 EDF1O60869 148 aaKnown RBP12.95□□□□□ -0.34
HDAC4-205ENST00000454542 DIAPH2O60879 1101 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 ICOSLGO75144 302 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 REM1O75628 298 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 HMGN2P05204 90 aaKnown RBP12.95□□□□□ -0.34
HDAC4-205ENST00000454542 CELA3AP09093 270 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 ENDOUP21128 410 aaKnown RBP12.95□□□□□ -0.34
HDAC4-205ENST00000454542 PTPN6P29350 595 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 EVI2BP34910 448 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 KRT20P35900 424 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 CCT3P49368 545 aaKnown RBP12.95□□□□□ -0.34
HDAC4-205ENST00000454542 MAN2A2P49641 1150 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 LASP1Q14847 261 aaKnown RBP12.95□□□□□ -0.34
HDAC4-205ENST00000454542 C3AR1Q16581 482 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 DECR1Q16698 335 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.95□□□□□ -0.34
HDAC4-205ENST00000454542 PGS1Q32NB8 556 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 FAM174BQ3ZCQ3 159 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 ANXA8L1Q5VT79 327 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 TIGD3Q6B0B8 471 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 ARHGAP11AQ6P4F7 1023 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 GOT1L1Q8NHS2 421 aaPredicted RBP12.95□□□□□ -0.34
HDAC4-205ENST00000454542 PIK3R3Q92569 461 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 C16orf58Q96GQ5 468 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 EBF4Q9BQW3 602 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 CCDC28BQ9BUN5 200 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 SERHL2Q9H4I8 314 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 GALNT9Q9HCQ5 603 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 ACKR4Q9NPB9 350 aa12.95□□□□□ -0.34
HDAC4-205ENST00000454542 MED4Q9NPJ6 270 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms