RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 IFI30P13284 250 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 JUNDP17535 347 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 ARL4DP49703 201 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 PPP1CAP62136 330 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 PYDC2Q56P42 97 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 PDZK1Q5T2W1 519 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 CAMKMTQ7Z624 323 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 CDK20Q8IZL9 346 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 LRRC25Q8N386 305 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-213ENST00000454468 OR8J1Q8NGP2 316 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 OR6Q1Q8NGQ2 317 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 RNFT2Q96EX2 444 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 RBM18Q96H35 190 aaKnown RBP11.24□□□□□ -0.61
SMPD4-213ENST00000454468 IFT27Q9BW83 186 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 MCOLN1Q9GZU1 580 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 KCMF1Q9P0J7 381 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 N6AMT1Q9Y5N5 214 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 URADA6NGE7 173 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 MAN2B1O00754 1011 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 PIP5K1CO60331 668 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 REM1O75628 298 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 KLHL18O94889 574 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 GYPBP06028 91 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 PKLRP30613 574 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 AKT2P31751 481 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 SMSP52788 366 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 HNRNPA0Q13151 305 aaKnown RBP11.24□□□□□ -0.61
SMPD4-213ENST00000454468 AMZ1Q400G9 498 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 SLC27A4Q6P1M0 643 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 PRICKLE2Q7Z3G6 844 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 TP53I13Q8NBR0 393 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-213ENST00000454468 SUN3Q8TAQ9 357 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 DOK1Q99704 481 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 SLC7A7Q9UM01 511 aa11.24□□□□□ -0.61
SMPD4-213ENST00000454468 A0A1B0GVC2 190 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 ZC3H12DA2A288 527 aaKnown RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 A6NIN4 97 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 SNTNA6NMZ2 147 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 MPZL2O60487 215 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 SOX30O94993 753 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 CLEC2LP0C7M8 214 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 ZNF10P21506 573 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 AHRP35869 848 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 CENPAP49450 140 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 ST3GAL3Q11203 375 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 HYAL1Q12794 435 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 TMEM35AQ53FP2 167 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 RSBN1Q5VWQ0 802 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 Q6ZNX1 250 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 PRR23CQ6ZRP0 262 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 OR13H1Q8NG92 308 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 SAMD8Q96LT4 415 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 PLA2G12AQ9BZM1 189 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 SAP130Q9H0E3 1048 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 CHST8Q9H2A9 424 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 THSD1Q9NS62 852 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 COL4A4P53420 1690 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 ZDBF2Q9HCK1 2354 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 PRAMEF27A3QJZ7 478 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 CCDC85CA6NKD9 419 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 K7EQS6 105 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 SLC2A10O95528 541 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 CELA2BP08218 269 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 RPL4P36578 427 aaKnown RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 RAB25P57735 213 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 SRP54P61011 504 aaKnown RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 MAT1AQ00266 395 aaKnown RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 PCDH1Q08174 1060 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 TMPRSS11AQ6ZMR5 421 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 COMTD1Q86VU5 262 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 SCAIQ8N9R8 606 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 OR7G2Q8NG99 324 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 TMEM255BQ8WV15 326 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 ZFPM2Q8WW38 1151 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 ELP4Q96EB1 424 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 YIPF6Q96EC8 236 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 PEX11GQ96HA9 241 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 DMRTB1Q96MA1 342 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 C1QTNF2Q9BXJ5 285 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 ZNF717Q9BY31 904 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 DDX31Q9H8H2 851 aaKnown RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 ACTR10Q9NZ32 417 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 RPS6KB2Q9UBS0 482 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 MRPS2Q9Y399 296 aaKnown RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 NAALAD2Q9Y3Q0 740 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 A0A087WUU8 490 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 A0A0A6YYC8 382 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 H0YGG7 62 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 I3L1I5 382 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 NUDT14O95848 222 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 FCARP24071 287 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 GCGRP47871 477 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 ARF3P61204 181 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 MRPS15P82914 257 aaKnown RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 TBCEQ15813 527 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-213ENST00000454468 ENTPD8Q5MY95 495 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 SLC30A8Q8IWU4 369 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 OR52L1Q8NGH7 329 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 OR9A4Q8NGU2 314 aa11.23□□□□□ -0.61
SMPD4-213ENST00000454468 GOT1L1Q8NHS2 421 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms