RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 CDNFQ49AH0 187 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 CATSPEREQ5SY80 951 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 MAVSQ7Z434 540 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 TMEM173Q86WV6 379 aaPredicted RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 OR4C15Q8NGM1 316 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 URM1Q9BTM9 101 aaKnown RBP11.42□□□□□ -0.58
SEC16A-207ENST00000453963 KATNBL1Q9H079 304 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 EPHA6Q9UF33 1036 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 C2orf74A8MZ97 194 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 CTDSP2O14595 271 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 PHYHO14832 338 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 TRAPPC6AO75865 159 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 BMPR1AP36894 532 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 ZXDBP98169 803 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 SLC14A2Q15849 920 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 LRIT3Q3SXY7 679 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 MFSD8Q8NHS3 518 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 SNX18Q96RF0 628 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 SLC6A7Q99884 636 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 ALG8Q9BVK2 526 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 ACPTQ9BZG2 426 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 KLF15Q9UIH9 416 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 WASF3Q9UPY6 502 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 KLK4Q9Y5K2 254 aa11.42□□□□□ -0.58
SEC16A-207ENST00000453963 OR5K4A6NMS3 321 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 HEPACAM2A8MVW5 462 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 H7C417 338 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 ERCC1P07992 297 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 WDR5P61964 334 aaKnown RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 PIN1Q13526 163 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 MRPL10Q7Z7H8 261 aaKnown RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 GTPBP8Q8N3Z3 284 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 IL17FQ96PD4 163 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 ZNF559Q9BR84 538 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 IL26Q9NPH9 171 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 PRTFDC1Q9NRG1 225 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 SEC14L2O76054 403 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 FARS2O95363 451 aaKnown RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 SLC16A8O95907 504 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 SFTPBP07988 381 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 KCNJ5P48544 419 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 ZNF140P52738 457 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 LBX1P52954 281 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 RAB41Q5JT25 222 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 HMGN2P46Q86SG4 172 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 PIANPQ8IYJ0 282 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 FAM109AQ8N4B1 249 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 HAVCR2Q8TDQ0 301 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 SLC41A3Q96GZ6 507 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 MVB12BQ9H7P6 319 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 MEPEQ9NQ76 525 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 CLEC4EQ9ULY5 219 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 CASC3O15234 703 aaKnown RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 KLF8O95600 359 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 SMIM18P0DKX4 95 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 PRKCAP17252 672 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 ELOAQ14241 798 aaKnown RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 TATDN3Q17R31 274 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 METAP1DQ6UB28 335 aaPredicted RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 CPOQ8IVL8 374 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 SLC7A13Q8TCU3 470 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 PDLIM5Q96HC4 596 aaKnown RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 ASB6Q9NWX5 421 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 FAM221BA6H8Z2 402 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 TTC34A8MYJ7 566 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 EDIL3O43854 480 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 DNAJB6O75190 326 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 GABARAPO95166 117 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 MSL3P1P0C860 447 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 CD34P28906 385 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 PTH2RP49190 550 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 RPS21P63220 83 aaKnown RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 CRTC1Q6UUV9 634 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 GSG1LQ6UXU4 331 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 SCD5Q86SK9 330 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 PTRH1Q86Y79 214 aaKnown RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 OR52E2Q8NGJ4 325 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 OR5M3Q8NGP4 307 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 ELP5Q8TE02 316 aa11.41□□□□□ -0.58
SEC16A-207ENST00000453963 RPL3LQ92901 407 aaKnown RBP11.41□□□□□ -0.58
SEC16A-207ENST00000453963 M0QZQ0 153 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 SLC33A1O00400 549 aaPredicted RBP11.4□□□□□ -0.58
SEC16A-207ENST00000453963 ARPC5O15511 151 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 GK2Q14410 553 aaPredicted RBP11.4□□□□□ -0.58
SEC16A-207ENST00000453963 RAB11BQ15907 218 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 AAK1Q2M2I8 961 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 ZNF440Q8IYI8 595 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 ISL2Q96A47 359 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 SLC6A16Q9GZN6 736 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 SRA1Q9HD15 236 aaKnown RBP11.4□□□□□ -0.58
SEC16A-207ENST00000453963 VNN3Q9NY84 501 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 SLAMF8Q9P0V8 285 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 A0A1W2PP55 124 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 K7ERQ8 282 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 TP53I11O14683 189 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 H2BFMP0C1H6 154 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 SSTR4P31391 388 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 CYCSP99999 105 aaKnown RBP11.4□□□□□ -0.58
SEC16A-207ENST00000453963 GNMTQ14749 295 aa11.4□□□□□ -0.58
SEC16A-207ENST00000453963 GRIN2CQ14957 1233 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms