RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 T-ENOLP0DO92 83 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 CNR1P21554 472 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 SLC1A2P43004 574 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 CXCR4P61073 352 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 ABCE1P61221 599 aaKnown RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 CRADDP78560 199 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 RELAQ04206 551 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 ZNF235Q14590 738 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 ABHD17BQ5VST6 288 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 ABLIM2Q6H8Q1 611 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 GDF7Q7Z4P5 450 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 ABHD12BQ7Z5M8 362 aaPredicted RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 CLNKQ7Z7G1 428 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 STXBP6Q8NFX7 210 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 KCTD4Q8WVF5 259 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 NSMAFQ92636 917 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 ALG12Q9BV10 488 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 SPATA5L1Q9BVQ7 753 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 TRIM15Q9C019 465 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 WNT10AQ9GZT5 417 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 MS4A7Q9GZW8 240 aaPredicted RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 UBQLN3Q9H347 655 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 ZNF334Q9HCZ1 680 aaPredicted RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 SEC14L3Q9UDX4 400 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 KIAA0100Q14667 2235 aaKnown RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 S1PR4O95977 384 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 SRPRAP08240 638 aaKnown RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 F3P13726 295 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 AOC1P19801 751 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 ACVRL1P37023 503 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 AVPR1AP37288 418 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 P2RY4P51582 365 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 RIDAP52758 137 aaKnown RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 EMP2P54851 167 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 TWF1Q12792 350 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 NFYCQ13952 458 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 ELAVL3Q14576 367 aaKnown RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 CHI3L2Q15782 390 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 LIPIQ6XZB0 460 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 CFAP77Q6ZQR2 320 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 RNF165Q6ZSG1 346 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 FBXO39Q8N4B4 442 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 RP9Q8TA86 221 aaKnown RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 DNAJB14Q8TBM8 379 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 PIWIL2Q8TC59 973 aaKnown RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 SCARB1Q8WTV0 552 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 AKAP1Q92667 903 aaKnown RBP eCLIP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 DLG3Q92796 817 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 FOXRED1Q96CU9 486 aaPredicted RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 SLC7A6OSQ96CW6 309 aaPredicted RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 L3HYPDHQ96EM0 354 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 ZNF512Q96ME7 567 aaPredicted RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 TRMOQ9BU70 441 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 PAPOLGQ9BWT3 736 aaKnown RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 MMP27Q9H306 513 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 LMAN1LQ9HAT1 526 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 NMRAL1Q9HBL8 299 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 MLXIPLQ9NP71 852 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 GTSE1Q9NYZ3 720 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 TMEM216Q9P0N5 145 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 MYEF2Q9P2K5 600 aaKnown RBP7.3□□□□□ -1.24
BRCC3-208ENST00000453705 MGAT4BQ9UQ53 548 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 WASF2Q9Y6W5 498 aa7.3□□□□□ -1.24
BRCC3-208ENST00000453705 TRBV2A0A0J9YWF9 115 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 FAM95CA0A1B0GW59 222 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 SH3PXD2BA1X283 911 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 TEX22C9J3V5 150 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 ATP6V1G2-DDX39BF2Z307 99 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 SLC30A4O14863 429 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 TRIM13O60858 407 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 LEFTY1O75610 366 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 DHFRP00374 187 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 RBP1P09455 135 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 ETS2P15036 469 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 RPS3P23396 243 aaKnown RBP eCLIP7.29□□□□□ -1.24
BRCC3-208ENST00000453705 BDKRB2P30411 391 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 CAPZBP47756 277 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 FHITP49789 147 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 OR2B6P58173 313 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 SHC2P98077 582 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 ATP1A4Q13733 1029 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 TECRLQ5HYJ1 363 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 COQ5Q5HYK3 327 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 IL23RQ5VWK5 629 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 TICAM1Q8IUC6 712 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 CUL9Q8IWT3 2517 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 LIX1Q8N485 282 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 CPSF7Q8N684 471 aaKnown RBP7.29□□□□□ -1.24
BRCC3-208ENST00000453705 OR51L1Q8NGJ5 315 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 SPPL2AQ8TCT8 520 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 WFIKKN2Q8TEU8 576 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 FCGR1BQ92637 280 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 MCUR1Q96AQ8 359 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 FAR2Q96K12 515 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 KLF6Q99612 283 aaPredicted RBP7.29□□□□□ -1.24
BRCC3-208ENST00000453705 INPP5KQ9BT40 448 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 ZNF385DQ9H6B1 395 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 MEAF6Q9HAF1 191 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 LSM7Q9UK45 103 aaKnown RBP7.29□□□□□ -1.24
BRCC3-208ENST00000453705 NUDT5Q9UKK9 219 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms