RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 NDC1Q9BTX1 674 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 GABARAPL3Q9BY60 117 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 ALOXE3Q9BYJ1 711 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 RIBC2Q9H4K1 309 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 NEK6Q9HC98 313 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 IL1RAPQ9NPH3 570 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 ABCB10Q9NRK6 738 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 CLCA2Q9UQC9 943 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 ZNF860A6NHJ4 632 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 PROB1E7EW31 1015 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 AIREO43918 545 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 KCNK2O95069 426 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 NSA2O95478 260 aaKnown RBP14.86□□□□□ -0.03
SNX17-204ENST00000453453 DLGAP3O95886 979 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 CTSBP07858 339 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 TRPC1P48995 793 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 DAPP51397 102 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 LIM2P55344 173 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 TNFRSF17Q02223 184 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 SF3B4Q15427 424 aaKnown RBP eCLIP14.86□□□□□ -0.035e-7■■■■□ 20.7
SNX17-204ENST00000453453 AGAP6Q5VW22 663 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 CCDC81Q6ZN84 652 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 NANOGNBQ7Z5D8 188 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 SERPINA11Q86U17 422 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 ARHGEF39Q8N4T4 335 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 AGBL5Q8NDL9 886 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 OR9A4Q8NGU2 314 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 ADAMTS18Q8TE60 1221 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 AGAP4Q96P64 663 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 SPATA9Q9BWV2 254 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 IKZF5Q9H5V7 419 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 CUTCQ9NTM9 273 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 GIMAP4Q9NUV9 329 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 FKBP14Q9NWM8 211 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 RARRES3Q9UL19 164 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 DAPP1Q9UN19 280 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 EXO1Q9UQ84 846 aaKnown RBP14.86□□□□□ -0.03
SNX17-204ENST00000453453 RNF6Q9Y252 685 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 ATG4BQ9Y4P1 393 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 MUC6Q6W4X9 2439 aa14.86□□□□□ -0.03
SNX17-204ENST00000453453 A0A0A6YYC8 382 aaPredicted RBP14.85□□□□□ -0.03
SNX17-204ENST00000453453 A0A1W2PR48 441 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 I3L1I5 382 aaPredicted RBP14.85□□□□□ -0.03
SNX17-204ENST00000453453 SGK494L7N484 410 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 PDPK1O15530 556 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 PROM1O43490 865 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 RDH16O75452 317 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 AIFM1O95831 613 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 KRT8P05787 483 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 KRT20P35900 424 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 OLR1P78380 273 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 ZFP36L1Q07352 338 aaKnown RBP14.85□□□□□ -0.03
SNX17-204ENST00000453453 PRSS41Q7RTY9 318 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 SLC46A3Q7Z3Q1 461 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 BPHLQ86WA6 291 aaPredicted RBP14.85□□□□□ -0.03
SNX17-204ENST00000453453 SLC7A5P1Q8MH63 180 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 MVB12AQ96EY5 273 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 CRELD1Q96HD1 420 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 OR6C1Q96RD1 312 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 STRADBQ9C0K7 418 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 SLC7A5P2Q9GIP4 190 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 SIAEQ9HAT2 523 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 PRDM9Q9NQV7 894 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 NDOR1Q9UHB4 597 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 BTNL2Q9UIR0 455 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 SRPK3Q9UPE1 567 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 TRAPPC4Q9Y296 219 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 PCDHGA1Q9Y5H4 931 aa14.85□□□□□ -0.03
SNX17-204ENST00000453453 RNASET2O00584 256 aaKnown RBP14.84□□□□□ -0.03
SNX17-204ENST00000453453 GDF9O60383 454 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 KRT75O95678 551 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 PRKACGP22612 351 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 NTSP30990 170 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 CCKBRP32239 447 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 PRIM2P49643 509 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 RAB38P57729 211 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 LSM3P62310 102 aaKnown RBP14.84□□□□□ -0.03
SNX17-204ENST00000453453 RUNX2Q13950 521 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 COLEC12Q5KU26 742 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 ANKRD34AQ69YU3 496 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 TTLL10Q6ZVT0 673 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 PIP4P1Q86T03 277 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 ANKRD46Q86W74 232 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 SNX29P2Q8IUI4 249 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 CA13Q8N1Q1 262 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 C9orf43Q8TAL5 461 aaPredicted RBP14.84□□□□□ -0.03
SNX17-204ENST00000453453 NETO1Q8TDF5 533 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 EXOSC8Q96B26 276 aaKnown RBP14.84□□□□□ -0.03
SNX17-204ENST00000453453 MMABQ96EY8 250 aaPredicted RBP14.84□□□□□ -0.03
SNX17-204ENST00000453453 EPYCQ99645 322 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 KRT84Q9NSB2 600 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 VNN3Q9NY84 501 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 UTS2RQ9UKP6 389 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 ENTPD4Q9Y227 616 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 MRPS33Q9Y291 106 aaKnown RBP14.84□□□□□ -0.03
SNX17-204ENST00000453453 PCDHGA3Q9Y5H0 932 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 NOX1Q9Y5S8 564 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 VPS13AQ96RL7 3174 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 H0YIG0 161 aa14.84□□□□□ -0.03
SNX17-204ENST00000453453 H3BMH7 237 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms